Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0771 ATGGTATCAACGGAGGAGCCATGGACAAATTGGTTGTGTGATTTGGAAGCAGATGACTATAGTTTCATAAACAGTTGTGTTGATGAAACTTTAGCATCTCATAATGATATTGATATAGTAGCAGCACCTAATAAGCCACCACAAGAGAATAATAATTCAAACTCATCAAAACGATCCTTTTCAACTGATAGCACCATGAGCAATATATCCTCAGGCTCAGGTGATGATAACACCAGCTTTGAGAGGCCAACCAAGACACTCAAGACAAGCACTTCAAGCAACTCTATTAGCATCACCGGCTACTTCCAGCAAAAGAATGACATCATCAGTACCCCTCCTCCCTCCTCCTGCTACATTCTCTCCTTCAATACTGCCGCCAATCCGGCAACACCGATGTTGAACGCTGATCTGGCCGCAAGGCCAAAAGGGAGCATTAACAAGGTGGTGGTGAATAATCATGGCAGGTCATCTTCTTTCCCGGCAAAAGGATCGCTGGAAAATCAGAAGAAGGAGCCAAGGCGCAGCAATAGTAGTAATCAGAATAAGACTAGTAATAATGGCTCAGCAGCGAATGGCAGTGGCAGATCTCCCCAACATGCTCATGATCACATAATTGCCGAGAGAATGAGGAGAGAAAAGATTAGCCAGCAGTTCATAGCTCTTTCCGCCCTTATTCCAGGCCTCAAAAAGATGGATAAGGCTACTGTGCTAGGGGACGCTATAAAGTATGTGAAACAGCTTCAGGAGCAAGTGAAGATGCTGGAAGATGAACAGGCGAAGAGGAAAAGCGTGGAAACGGTGGTGTATGTTGAGAAATCAAAGGTGTATGGTGCAGAGGAAGATGTGTCGGACACAAACTCGTCGAATTCAGGGGACGGAAACTCGTATGAAATCTCGAGAACAAACCGGTGTCTGCCAGAAGTAGAGGCAAGGGTGTCAGAGAAGAACGTGCTGATTCGAATCCACTGCGAGAAGCACAAAGGGTTGCTCATGAACATTCTCAGGGAGATTGAGAAACTCCATCTCTCTGTGATCAATAGCAGTGCCTTGCTTTTCGGGTCCTCCATTGTCGACATTACCATCACTGCCGAGATGGATGATGGGTACAGGCTAAGCGTGAAGGAGCTTGCTAGAAACCTTAGAGGGGGACTGATGCAATTTATGTAG 1167 0.4584 MVSTEEPWTNWLCDLEADDYSFINSCVDETLASHNDIDIVAAPNKPPQENNNSNSSKRSFSTDSTMSNISSGSGDDNTSFERPTKTLKTSTSSNSISITGYFQQKNDIISTPPPSSCYILSFNTAANPATPMLNADLAARPKGSINKVVVNNHGRSSSFPAKGSLENQKKEPRRSNSSNQNKTSNNGSAANGSGRSPQHAHDHIIAERMRREKISQQFIALSALIPGLKKMDKATVLGDAIKYVKQLQEQVKMLEDEQAKRKSVETVVYVEKSKVYGAEEDVSDTNSSNSGDGNSYEISRTNRCLPEVEARVSEKNVLIRIHCEKHKGLLMNILREIEKLHLSVINSSALLFGSSIVDITITAEMDDGYRLSVKELARNLRGGLMQFM* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0771 388 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 198 247 IPR011598 GO:0046983
Aev05g0771 388 MobiDBLite consensus disorder prediction 40 93 - -
Aev05g0771 388 Coils Coil 237 264 - -
Aev05g0771 388 MobiDBLite consensus disorder prediction 280 298 - -
Aev05g0771 388 MobiDBLite consensus disorder prediction 279 298 - -
Aev05g0771 388 Gene3D - 197 268 IPR036638 GO:0046983
Aev05g0771 388 SMART finulus 204 253 IPR011598 GO:0046983
Aev05g0771 388 PANTHER BHLH TRANSCRIPTION FACTOR 3 385 - -
Aev05g0771 388 MobiDBLite consensus disorder prediction 177 195 - -
Aev05g0771 388 PANTHER BASIC HELIX LOOP HELIX (BHLH) DNA-BINDING FAMILY PROTEIN 3 385 - -
Aev05g0771 388 MobiDBLite consensus disorder prediction 45 93 - -
Aev05g0771 388 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 195 260 IPR036638 GO:0046983
Aev05g0771 388 MobiDBLite consensus disorder prediction 150 201 - -
Aev05g0771 388 MobiDBLite consensus disorder prediction 150 164 - -
Aev05g0771 388 CDD bHLH_AtNAI1_like 199 273 - -
Aev05g0771 388 Pfam Helix-loop-helix DNA-binding domain 203 248 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0771 Aev-Chr5 5388348 5389871 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0771 165 388 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 45.536 3.88e-52 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev05g0771 HLH 2.8e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0771 - - lang:109348843 344.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0771 05 5388348 5389871 Aev01g0462 01 4089567 4092536 PCT