Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0185 ATGACTGCTGAAAAGGGACAGAAATTTGTGAGATTTGAGGATTGGAGATCAGAATCATCTGCAAGTTTTGAGAAGAGTGATTCATTCACTGATGGATTTCTGAAAAAAGGATTGAAATCAAGTTCAAGTTCTCCAAGCAATGATGGGACAAACAAAAAATTTGGTAGTAGGATCAGAGTTCTTGATCCGCAGGGTCCTCTGCTTCAGAAATGGAACAAAATCTTTGTGATAACATGTGTTATGGCAATCTCTGTTGACCCTCTTTTCTTCTATGTACCAGCTATCAATGAAGAGCAAAAATGCCTCAATCTTGATCAGAGATTGAAGATCACTGCTTGTGTTCTTCGCACCTTCTTCGATCTTTTCTACATTCTTCGCATAAGCTTTCAGTTCCGAACCGGTTTCATCGCCCCTTCTTCGCGCGTGTTCGGAAGGGGCGAGCTTGTTGATGACATTGGTGCCATAGTTAAGAGATACTTGTTTTCTGATTTCATCATTGACATTCTGTCAATTATTCCTCTTCCTCAGATGGTGGTGGTGTTAGAATACTCAGTTCCACGTGAGACAAAGAATTTGTTGAAGTACACAATAATAGCTCAGTATGTGCCAAGGCTTCTGAGGCTATATGTGTTATTCAAAGAAGTAACCAGCACTTCTGGCATACTCACTGAGACTGCTTGGGCTGCTGCTGCTTATAATCTTTTTCTCTACATGCTTGCAAGTCATGTAGTTGGAGCTTTCTGGTATCTGTTCTCAATAGAGTCAGAGGTTAGGTGTTGGAGGCAGATTTTGCAGCTTAACAATATATCTGATGGTTTTTACCTTAGCTGTAGAAGAAGTAACTCACAACAAGTTCAATCACTCTTGAGTAGTAATGCTTCTTGCCCTTTCACTGAGATTGAGAACTTCACAGATCCACAAGCTTACAACTTTGGAATATACTTACAAGCCCTACAGCTTCATATGGTTGAATCAAGCACAGATTTTGCTCACAAGTTCTTTTTCTGCTTTTGGTGGGGTTTTCGCAATCTAAGTTCTCTTGGGCAAAACCTGAGTTGTAGTACTTATATTGGGGAGAATATCTTTGCTATCTTCATTGCCATCTTTGGATTGGTTCTGTTCTCATCACTTATAGGAAACATGCAGAAATATCTGCAATCTACAACTGTAAGAGTTGAAGAGATGAGAGTCAAGAGAAGGGACGCAGAGCGGTGGATGTCGCACCGTATGCTACCGGACAACTTGAAGGAGAGGATCAGAAGGTATGAGCAATACAAATGGCAAGAAAATAGGGGTGTTGAGGAGGAAGCATTGATTGGAAACCTCCCTAAAGATCTCAGAAGGGACATAAGACGCCATCTCTGCTTGGATCTACTCAAACGAGTGCCAATGTTTGAGAGCATGAACAAACAGTTGTTGGATGCAATGTGTGATAGACTGAAGCCAGTCCTTTATACAGAGAAGAGCAACATTGTTTGCGAAGGAGATCCGGTCGATGAAATGCTCTTCATTATGCGAGGAAACCTTGCTACCGCCACGACAAACGGTGGGAGAACCGGTTTCTTCAACTCCTCTGTGCTCAAAGCTGGTGATTTTTGTGGAGAGGAGCTTCTGACATGGGCTTTGGATCCAAACTCCTCACCAAATTTACCTATCTCAACTAGGACAGTACAAACCATATCAGAAGTTGAAGCTTTTGCTCTTAAGGCTGATGATTTCAAGTTTGTTGCTTCTCAATTTCGCCGCCTTATTAACAGCAAACAGCTCCAGCATACTTTCAGGTTCTATTCACTGCAATGGAAGACATGGGGGGCATGTTTCATACAAGCAGCCTGGCGCCGGTACCGGAAGAAGAAGGCCGCGAGGGCATTGCGCGAAGCAGAAGATGGGACGGCTTCTTGTTTCCCAAGTCAAGATGGATATGACTATGGTTCCTCTCAAGATGGTTATGGCTCCTCTCTAGATGGTTATGGTTCCTCATCAAGCTTTGCTTCAACTGTGTATGCAAAAAAGTTTGTATCCAATGCATTAAGACCCTTAAGAACCGGCAAACGCAACCGAGTTCCGCCGACACAGAGGTTACTTCCTCTGCTTCCTCAGAAGCCAGCTGAGCCAGACTTTACCACTCAGAAAAACTAA 2139 0.4287 MTAEKGQKFVRFEDWRSESSASFEKSDSFTDGFLKKGLKSSSSSPSNDGTNKKFGSRIRVLDPQGPLLQKWNKIFVITCVMAISVDPLFFYVPAINEEQKCLNLDQRLKITACVLRTFFDLFYILRISFQFRTGFIAPSSRVFGRGELVDDIGAIVKRYLFSDFIIDILSIIPLPQMVVVLEYSVPRETKNLLKYTIIAQYVPRLLRLYVLFKEVTSTSGILTETAWAAAAYNLFLYMLASHVVGAFWYLFSIESEVRCWRQILQLNNISDGFYLSCRRSNSQQVQSLLSSNASCPFTEIENFTDPQAYNFGIYLQALQLHMVESSTDFAHKFFFCFWWGFRNLSSLGQNLSCSTYIGENIFAIFIAIFGLVLFSSLIGNMQKYLQSTTVRVEEMRVKRRDAERWMSHRMLPDNLKERIRRYEQYKWQENRGVEEEALIGNLPKDLRRDIRRHLCLDLLKRVPMFESMNKQLLDAMCDRLKPVLYTEKSNIVCEGDPVDEMLFIMRGNLATATTNGGRTGFFNSSVLKAGDFCGEELLTWALDPNSSPNLPISTRTVQTISEVEAFALKADDFKFVASQFRRLINSKQLQHTFRFYSLQWKTWGACFIQAAWRRYRKKKAARALREAEDGTASCFPSQDGYDYGSSQDGYGSSLDGYGSSSSFASTVYAKKFVSNALRPLRTGKRNRVPPTQRLLPLLPQKPAEPDFTTQKN* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0185 712 CDD CAP_ED 464 596 IPR000595 -
Aev02g0185 712 SUPERFAMILY Voltage-gated potassium channels 62 386 - -
Aev02g0185 712 SUPERFAMILY cAMP-binding domain-like 393 581 IPR018490 -
Aev02g0185 712 Pfam Ion transport protein 71 392 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Aev02g0185 712 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 8 710 - -
Aev02g0185 712 MobiDBLite consensus disorder prediction 681 712 - -
Aev02g0185 712 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 8 710 - -
Aev02g0185 712 Gene3D Jelly Rolls 462 582 IPR014710 -
Aev02g0185 712 Gene3D - 73 388 - -
Aev02g0185 712 SMART cnmp_10 464 595 IPR000595 -
Aev02g0185 712 Pfam Cyclic nucleotide-binding domain 485 576 IPR000595 -
Aev02g0185 712 ProSiteProfiles cAMP/cGMP binding motif profile. 464 574 IPR000595 -
Aev02g0185 712 Gene3D Helix hairpin bin 391 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0185 Aev-Chr2 1348451 1352770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0185 5 709 Ion Channels AT5G53130 59.675 0.0 838
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0185 K05391 - gmx:100795201 938.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g0185 02 1348451 1352770 Aev02g0185 02 1348451 1352770 ECH
Aev06g1024 06 6864545 6867615 Aev02g0185 02 1348451 1352770 PCT