Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00774 ATGGAAGCTGTTTTATTCGCCGCTAATCCAGCTTCTCACCTCAAACTTCTTCCCACTCTCAAACAACCCTTCTCTTCCACCAACCACCTCCCCTTCCGCCACAAAACCAACCACGTCCACCTCCCTCCTCTCTCCGCACTCCAAAACCAGAGCCAGCCAACTCCCACCGAAGATGAATCCTACGGCGAGGTCAAGAAAATCATCGGAAGCAGAGCCCTCGAAGATGCCACTGGAATGGAGTACCTCATAGAGTGGAAAGACGGTCATGCCCCTTCTTGGGTCCCCTCTGACTTCATAGCCAAAGACGTCCTCTCCGAATACGAGTCTCCCTGGTGGACCGCAGCTAAGAAAGCCGACCACGACGCACTCCGTCAAATCCTCGACTCCGATGATGGTCGGGACGTCAACGCCGTCGACTCAGACGGCCGCACTGCCCTCCTCTTCGTCGCTGGACTGGGTTCTGAGCCCTGCGTCCGCCTCCTCGCGGAGTCCGGCGCCGATGTCGACCACCGCGACAACGCCGGCGGCCTCACCGCTCTCCACATGGCGGCGGGTTACGTGAGGCCCGGCGTCGCGAAGCTTCTCCTGGACCTCGGGGTGGTTAGGGTTTTGGAAGGCGCGGTTTTCGAGTTCGCGGAGGTGGAGGAGATTATTGAGCGGAGGGGGAAGGGTGAGAATTTGGAGTACCTTGTGCGGTGGAAGGATGGTGGCGCCAACGAGTGGGTGAAGGCGAGGTTTGTGGCGGAGGATCTGGTTAGGGATTACGAAGCTGGCCTTGAGTACGCGGTGGCGGAGGCTGTGCTTGGGAAAAGGGTCGGCGATGAAGGGGGACCAGAGTTTTTAGTTAAGTGGGCTGATATGGATGAGCCCACTTGGGAGCCTGAGGAGAATGTGGATCCTGAACTCGTTAAGGAGTTTGAGTTAAGTAGTAATGGTCAGGTCCAAATTAGTAATGGGCCTATTCCGAGTAATGGGCCTGAAGTGGTGTTTTCGAATCAGGACAGCCTGTGA 1011 0.5707 MEAVLFAANPASHLKLLPTLKQPFSSTNHLPFRHKTNHVHLPPLSALQNQSQPTPTEDESYGEVKKIIGSRALEDATGMEYLIEWKDGHAPSWVPSDFIAKDVLSEYESPWWTAAKKADHDALRQILDSDDGRDVNAVDSDGRTALLFVAGLGSEPCVRLLAESGADVDHRDNAGGLTALHMAAGYVRPGVAKLLLDLGVVRVLEGAVFEFAEVEEIIERRGKGENLEYLVRWKDGGANEWVKARFVAEDLVRDYEAGLEYAVAEAVLGKRVGDEGGPEFLVKWADMDEPTWEPEENVDPELVKEFELSSNGQVQISNGPIPSNGPEVVFSNQDSL 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00774 336 SMART chromo_7 261 311 IPR000953 -
Adu03g00774 336 SMART chromo_7 60 112 IPR000953 -
Adu03g00774 336 SMART chromo_7 210 260 IPR000953 -
Adu03g00774 336 Gene3D - 258 308 - -
Adu03g00774 336 PANTHER SIGNAL RECOGNITION PARTICLE 43 KDA PROTEIN, CHLOROPLASTIC 5 199 IPR030300 GO:0009416|GO:0009507|GO:0045038|GO:0080085
Adu03g00774 336 ProSiteProfiles Ankyrin repeat region circular profile. 141 173 - -
Adu03g00774 336 CDD CD3_cpSRP43_like 259 308 - -
Adu03g00774 336 Pfam Chromo (CHRromatin Organisation MOdifier) domain 264 307 IPR023780 -
Adu03g00774 336 SUPERFAMILY Chromo domain-like 57 111 IPR016197 -
Adu03g00774 336 MobiDBLite consensus disorder prediction 313 336 - -
Adu03g00774 336 SUPERFAMILY Chromo domain-like 260 307 IPR016197 -
Adu03g00774 336 PANTHER SIGNAL RECOGNITION PARTICLE 43 KDA PROTEIN, CHLOROPLASTIC 200 313 IPR030300 GO:0009416|GO:0009507|GO:0045038|GO:0080085
Adu03g00774 336 SUPERFAMILY Chromo domain-like 210 257 IPR016197 -
Adu03g00774 336 SMART ANK_2a 175 205 IPR002110 GO:0005515
Adu03g00774 336 SMART ANK_2a 106 137 IPR002110 GO:0005515
Adu03g00774 336 SMART ANK_2a 141 170 IPR002110 GO:0005515
Adu03g00774 336 PANTHER HOMEOBOX PROTEIN WARIAI 200 313 - -
Adu03g00774 336 PANTHER HOMEOBOX PROTEIN WARIAI 5 199 - -
Adu03g00774 336 ProSiteProfiles Chromo and chromo shadow domain profile. 262 307 IPR000953 -
Adu03g00774 336 Pfam Ankyrin repeats (3 copies) 114 199 IPR002110 GO:0005515
Adu03g00774 336 SUPERFAMILY Ankyrin repeat 107 200 IPR036770 -
Adu03g00774 336 Gene3D - 208 257 - -
Adu03g00774 336 Gene3D - 58 105 - -
Adu03g00774 336 Gene3D - 106 207 IPR036770 -
Adu03g00774 336 ProSiteProfiles Ankyrin repeat profile. 141 173 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00774 114 199 Ion Channels AT2G25600 41.860 1.72e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00774 K12271 - gmx:100818382 449.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00774 03 7281663 7282755 Adu03g00774 03 7281663 7282755 ECH