Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00175 ATGGACGAAGCACTGAGGCGCCTCAACGGCATGCCACTCCTTTCCAAACCACCTCCCAACAACCCCAGAACCAAGCAGACCTTGCGAGACACCAGCACTGCCTCCACTGCCGGACCCATGAGGTACCGCGGCGTCAGGCGGAGGCCATGGGGCCGTTATGCCGCCGAGATAAGGGACCCTCAGTCCAAGGAGCGCCGTTGGCTGGGGACTTTCGACACTGCGGAGGAAGCCGCCTGCGCCTACGACTGCGCTGCCAGAGCCATGCGTGGCCATAAGGCAACCACCAACTTCGCGTACCATACTTTACCTTCTTACCCTTCTTCTATCACCATCACCAGCAACCATAACAATCTCCTCAACTGCCATAACCACCTCTTCACTCATAACCAGTTCAGCTTCCCTTATCATCATAACCAACTCTTCAACGGCCATAACCGCCACTTCGGAGTTTGGTCTGAACCTTTCTCTGCTTCAACCTTCCAGGAACAGCGAAACCTTGACTCCATCAACATGCTTCTCCACCGAGACTTGATAGGCTCTTCTTCCTCCGACAATTTATCCTACAACATGGGCAGTTTTGTCAATTCACATCCCGGCAATGTTCCTAATAATAACTACTCCCCACCTTGTTCTGACACAAGCAATCTCGGTTGTGGCGGTGGAAGCAAGATCGATAATACTAACAATAATGAAGCTGATGGTGGTGACGAAGAAGACTCAAAGGAGCAATTCTATGAAGGTTCAGGGTCATCAGGGTTGTTGGAAGAAATAGTTAAGGGTTTCTTGAAGAAAAAGCCAAAGCTCAACAAATGTGAGAGATTGTTAGGTACCAGGACCACTGCTTCAGACGGTTCTTGCCACTCATCATTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTACTCCTCTGCTTGTTTTCGGCGAGTCAAAGATAGACGAGGGTTTCGGCGTTCATTTGGATCAACAGGGTTTCCAATACATGCAGCAGCTTGGTGGTGGTTTCGATAATGATTTTAGCAATATGGTTATGCTGCCTAACATCCCTCTTCAAGAGACTAACAACCAAATCATGACGACCATGATGATGAATAATGATAATAATCAGCAGAACTAG 1116 0.4946 MDEALRRLNGMPLLSKPPPNNPRTKQTLRDTSTASTAGPMRYRGVRRRPWGRYAAEIRDPQSKERRWLGTFDTAEEAACAYDCAARAMRGHKATTNFAYHTLPSYPSSITITSNHNNLLNCHNHLFTHNQFSFPYHHNQLFNGHNRHFGVWSEPFSASTFQEQRNLDSINMLLHRDLIGSSSSDNLSYNMGSFVNSHPGNVPNNNYSPPCSDTSNLGCGGGSKIDNTNNNEADGGDEEDSKEQFYEGSGSSGLLEEIVKGFLKKKPKLNKCERLLGTRTTASDGSCHSSFPPPPPPPPPPPTPLLVFGESKIDEGFGVHLDQQGFQYMQQLGGGFDNDFSNMVMLPNIPLQETNNQIMTTMMMNNDNNQQN 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00175 371 Gene3D AP2/ERF domain 40 99 IPR036955 GO:0003700|GO:0006355
Adu02g00175 371 SMART rav1_2 41 104 IPR001471 GO:0003700|GO:0006355
Adu02g00175 371 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 24 291 - -
Adu02g00175 371 SUPERFAMILY DNA-binding domain 41 99 IPR016177 GO:0003677
Adu02g00175 371 ProSiteProfiles AP2/ERF domain profile. 41 98 IPR001471 GO:0003700|GO:0006355
Adu02g00175 371 PRINTS Ethylene responsive element binding protein signature 42 53 IPR001471 GO:0003700|GO:0006355
Adu02g00175 371 PRINTS Ethylene responsive element binding protein signature 64 80 IPR001471 GO:0003700|GO:0006355
Adu02g00175 371 MobiDBLite consensus disorder prediction 288 302 - -
Adu02g00175 371 MobiDBLite consensus disorder prediction 217 249 - -
Adu02g00175 371 MobiDBLite consensus disorder prediction 1 41 - -
Adu02g00175 371 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ESR2-LIKE 24 291 - -
Adu02g00175 371 Pfam AP2 domain 41 91 IPR001471 GO:0003700|GO:0006355
Adu02g00175 371 MobiDBLite consensus disorder prediction 20 38 - -
Adu02g00175 371 MobiDBLite consensus disorder prediction 279 302 - -
Adu02g00175 371 CDD AP2 41 100 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00175 Adu-Chr2 2074390 2075505 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00175 40 264 AP2-EREBP Transcription Factor Family AT1G24590 41.026 2.70e-34 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Adu02g00175 AP2 1.8e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00175 - - aip:107641556 541.576