Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01659 ATGAAACATGTAATAAAGCAGGAATTCATTGCATCACTGAGAAGGCATCACCAACAAGGTAGGTGGCAAGTGAGAATTGGTTGTGTTGCTGGAAACAAAGATCTTTACTTGGGAACATTTGCAACTGAAGAGGAAGTTGCTGAGGCATATGATATAGCAGCTATAAAGTTCCGAGGTGCAAATGCAGTAACCAACTTTGAAATGAGCAGGTACGATGTTGATGCCATAATGAAGAGCTCTGTTCCTGTTGGTGGCGCGGCAAAACGCTTGAAACTCTCCCTAGAATCAGAGCAGAATTTATTTTGA 306 0.4183 MKHVIKQEFIASLRRHHQQGRWQVRIGCVAGNKDLYLGTFATEEEVAEAYDIAAIKFRGANAVTNFEMSRYDVDAIMKSSVPVGGAAKRLKLSLESEQNLF 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01659 101 Gene3D AP2/ERF domain 12 69 IPR036955 GO:0003700|GO:0006355
Adu01g01659 101 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR AIL6 1 99 - -
Adu01g01659 101 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 99 - -
Adu01g01659 101 ProSiteProfiles AP2/ERF domain profile. 1 67 IPR001471 GO:0003700|GO:0006355
Adu01g01659 101 SUPERFAMILY DNA-binding domain 15 69 IPR016177 GO:0003677
Adu01g01659 101 Pfam AP2 domain 13 59 IPR001471 GO:0003700|GO:0006355
Adu01g01659 101 SMART rav1_2 15 73 IPR001471 GO:0003700|GO:0006355
Adu01g01659 101 CDD AP2 15 69 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01659 Adu-Chr1 53241765 53243370 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01659 1 96 AP2-EREBP Transcription Factor Family AT5G10510 74.336 2.25e-41 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Adu01g01659 AP2 9e-06 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01659 K09285 - adu:110280544 191.43