Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00721 ATGAATAACAATAATAATAATATTCAGTTTCCTTGTTTTCCAACACAAACAACAGATCTCCTTAACCTTTTCCATTTTCCAACAAGTCCTAAGAACTCTTCTATCTCCTTTGAAAACCACAACAACATAATAACATGTCTTCCAAACCCTAGTAGCAGTAGTAGCAACATCATTGTGGGACAAGAAAGTTCAAATTTTTCCAATGTTTTCAATGACCCATTATTGCATTTGAACCTTCAAGCACCTCCTCTGCTTCATCAATCATCATCAATGAGGGAGTTGTTTCATCATCATGGCTACTACAACATGGTACCAACAACAACAACAACAACATCAAGAAGTGATTTTTTGTTTGGATTAGGGGAAAATAACAACAACAACAATAATAATAATGACATTATTGTTGAATTAGAAAATGGTGGTTATGGGAGAGATGTTCTTGAAAATGGGGTGCTAGAAGAGTTCACTAATCATCATCAAGAAGTGGCTAATAAGAAGAGAGGAGGAAAAAGGAGCATTAACAACAATAATAAGCAATTTAGTAGTACTAACACTGAGAGACAAAGGAGAGTGGATTTGGGTGGCAAATTTGATGCTTTGAAAGAACTCATACCAAGCTCCACCAAGAATGATAGAGCATCAGTGGTAGGAGATGCTATTGACTACATCAAAGAGCTTCTAAGAACAGTGAATGAACTCAAATCATTGGTGGAGAAAAAGAGGTATGAAAAACAAAGGGTGAAGAAGAAGCTCAAAATTGAAGATGAAGAAGAAGAAAAAGAAGATGATGAGAATAATTCATCATCATATAGTGAGAGCCTAACAAGGAGTTCTTGGATACAAAGAAAATCAAAAGAAAGTGAGGTTGATGTGAGAATCATTGACAATGAGGTAACAATAAAGATTGTTCAAAGGAAGAGGGTCAATGACAATAATTGCATATTAGTTTATGCTTCAAAGGTTCTTGATGAACTTAAACTTGATCTTCAACATGTTGGTGGTGGCCACATTGGTGATTTCTGCAGCTTTCTCTTCAATAGCAAGATATGTGAAGGTTCATCGGTATATGCTAGTGCCATAGCCAACAAGCTTATTGAGGTCATGGACAGAAGTTTGTCACCAATATGA 1128 0.3564 MNNNNNNIQFPCFPTQTTDLLNLFHFPTSPKNSSISFENHNNIITCLPNPSSSSSNIIVGQESSNFSNVFNDPLLHLNLQAPPLLHQSSSMRELFHHHGYYNMVPTTTTTTSRSDFLFGLGENNNNNNNNNDIIVELENGGYGRDVLENGVLEEFTNHHQEVANKKRGGKRSINNNNKQFSSTNTERQRRVDLGGKFDALKELIPSSTKNDRASVVGDAIDYIKELLRTVNELKSLVEKKRYEKQRVKKKLKIEDEEEEKEDDENNSSSYSESLTRSSWIQRKSKESEVDVRIIDNEVTIKIVQRKRVNDNNCILVYASKVLDELKLDLQHVGGGHIGDFCSFLFNSKICEGSSVYASAIANKLIEVMDRSLSPI 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00721 375 CDD bHLH_AtMYC1_like 185 241 IPR045896 -
Adu01g00721 375 Gene3D - 177 254 IPR036638 GO:0046983
Adu01g00721 375 MobiDBLite consensus disorder prediction 169 188 - -
Adu01g00721 375 SMART finulus 183 232 IPR011598 GO:0046983
Adu01g00721 375 Pfam Helix-loop-helix DNA-binding domain 185 226 IPR011598 GO:0046983
Adu01g00721 375 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 177 226 IPR011598 GO:0046983
Adu01g00721 375 PANTHER TRANSCRIPTION FACTOR BHLH91 6 372 IPR045895 GO:0006355|GO:0048658
Adu01g00721 375 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 177 244 IPR036638 GO:0046983
Adu01g00721 375 PANTHER TRANSCRIPTION FACTOR BHLH91 6 372 - -
Adu01g00721 375 Coils Coil 223 273 - -
Adu01g00721 375 MobiDBLite consensus disorder prediction 163 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00721 Adu-Chr1 9722994 9725041 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00721 15 370 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31210 40.267 3.93e-62 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu01g00721 HLH 6.6e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00721 - - aip:107643853 618.616