Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g02161 ATGGAGAAGCCATGGCAGACTAGTTTTCCTTTACCTCTTGATATGGATGGTGCTGAAGTAGATTTCCACGAGCAGTACAATGAAATGATGTGTTTGGATGATGAGGAGGAAGAGTTTCTGAGAAGCATTATGCAGCAACCAGCTGGTCGTCATTATCAGTTTTCTCAAACAGAAACTGAGAATAACGACAGTTTCAGCAAGCATGGTTCGAAGGATGAAAACGACGTCGTCGTGGTGTCTCCCAGGGCATACGTTCTGTCATTTGATACCCATGACATAGAACCAATAATCTCAAAACAACAAGAATCTAAGAAACAATGTTCGTCGAAAAGAATCAGAGCGAGGCATAACGCTGAACCGAGTAAGAGGAAAAGAATTAGGTCTTCGGAGAAAGTAGTGGATCATATAATGGCAGAGAGGAAACGGAGACAACAAATTGCAGAAAGGTTCATTGCACTTTCTGCAATTATTCCTGACTTGAAGAAGGTGGACAAAGCGACTGTACTGGACGAAGCTATAAAATACGTGAAACAACTTCAAGAGCGTGTAATAGAACTAGAGAAAGAGACATCAATGTTATCCAAAAAGAAAACTGAGATTTGTGGGAAGAATGACGATTTCTGGGAAGTAATTGAAGAACTTCCTAAGATTCAAGTAAGAGTTTCAGAGAAGCAAGTGCTTCTGGGAATCCATTGCAAGAAACAAAAGGGCATCGAGTTCAAAATACTGAATTTACTAGAGAATATTCATCTTCGTGTCTCCAGTAGCAGCGTCTTGCCATTTGGGAATTCCACTCTTGGGATTAACATTATTGCTCAGATGGCTGATGAATATAGGATGCCAATGAATGAAATGATGAAAAACATTAGACAAATTCTACTAAAGTCGCATGATCACGAGGTTGATCCGTACTAG 915 0.4011 MEKPWQTSFPLPLDMDGAEVDFHEQYNEMMCLDDEEEEFLRSIMQQPAGRHYQFSQTETENNDSFSKHGSKDENDVVVVSPRAYVLSFDTHDIEPIISKQQESKKQCSSKRIRARHNAEPSKRKRIRSSEKVVDHIMAERKRRQQIAERFIALSAIIPDLKKVDKATVLDEAIKYVKQLQERVIELEKETSMLSKKKTEICGKNDDFWEVIEELPKIQVRVSEKQVLLGIHCKKQKGIEFKILNLLENIHLRVSSSSVLPFGNSTLGINIIAQMADEYRMPMNEMMKNIRQILLKSHDHEVDPY 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g02161 304 Coils Coil 169 196 - -
Accr9g02161 304 SMART finulus 136 185 IPR011598 GO:0046983
Accr9g02161 304 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 133 196 IPR036638 GO:0046983
Accr9g02161 304 Gene3D - 126 201 IPR036638 GO:0046983
Accr9g02161 304 MobiDBLite consensus disorder prediction 50 72 - -
Accr9g02161 304 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 130 179 IPR011598 GO:0046983
Accr9g02161 304 MobiDBLite consensus disorder prediction 97 115 - -
Accr9g02161 304 PANTHER BHLH TRANSCRIPTION FACTOR 38 295 - -
Accr9g02161 304 MobiDBLite consensus disorder prediction 97 130 - -
Accr9g02161 304 Pfam Helix-loop-helix DNA-binding domain 134 180 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g02161 Accr-Chr9 46438519 46441943 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g02161 134 293 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22770 41.711 1.29e-38 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr9g02161 HLH 1.3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g02161 - - pcin:129287632 280.411