Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01451 ATGGAGCTTGCAACTGTAAAAACGGAATTCTACCCAAGAAAACATAGGATGTTCACGATGGAAGGTGGGAATATTGACACAAAGTGCATGAAAAGGCGGCGAAGAGACTTATCGGTGACAGTTTTAGAGGACAATGAGAAACAAGAGCAACCACAGCAGGGTGTTCAATCAAATACTACTACTGTCAAGAAAAGCTCAAGGTTTCGTGGAGTTAGCAGACATAGATGGACAGGGAGATATGAAGCTCATTTATGGGACAAAGGGACTTGGAATCCAACTCAAAAGAAGAAAGGGAAGCAAGGAGCTTATGCTGAAGAAGAAGCTGCTGTTAGAGCATATGATTTGGCTGCACTCAAGTATTGGGGAACTTCTACCTTCACAAACTTCCCTGTATCTAATTATCAGAACGAGATTGAGATAATGAAAACTATGACAAAAGAAGAATATATTGCTTCTTTAAGAAGAAGAAGCAGTGGCTTTTCCAGAGGAGTATCAAAGTACAGAGGAGTAGCAAGGCACCATCACAATAGGAGGTGGGAAGCAAGAATAGGGAGAGTGTTTGGTGACAAGTACCTCTACCTTGGCACTTACAGTACGCAAGAAGAGGCTGCTCGTGCATATGATATAGCAGCTATAGAATACAGAGGCTTGAACGCAGTAACAAACTTTGATTTGAGCACATATATTAGATGGCTAAGGCCTGAAGCCCTTAATACTACTCCTCAAGAACAACAAAAGAACCCAGAATTACACAATCTCATGACGAACCCTAGCTTCACCCAAACCAGAGAAATCGCTGAGGTACCCAAGTTCAATCGGAATCCAAAGGAGCAAGACATACCTCAGTATTCAACCCCTTTATGTTATAGTAATAGGGCCAATTCATCGTCTTCTCCGACAGCATTAGGGCTTCTGCTGCAATCGTCAGTGTTCAGAGAGCTAATGCAGAAAAATATGAATCAGGGAAAAATTGAAGAAGAACAAGAAGAAGGAAGTAATCGGTTTGCTTACTTGTACTCTTCCCATGGCAATAGAATACCAAATTTACAGTTACCGGAAGAGAAAGCTTTGCCGCCACAGCATCATAGAACTGGTCAATCTGTATGGGATGAGTGCTTTCAACGAATCTGA 1131 0.4182 MELATVKTEFYPRKHRMFTMEGGNIDTKCMKRRRRDLSVTVLEDNEKQEQPQQGVQSNTTTVKKSSRFRGVSRHRWTGRYEAHLWDKGTWNPTQKKKGKQGAYAEEEAAVRAYDLAALKYWGTSTFTNFPVSNYQNEIEIMKTMTKEEYIASLRRRSSGFSRGVSKYRGVARHHHNRRWEARIGRVFGDKYLYLGTYSTQEEAARAYDIAAIEYRGLNAVTNFDLSTYIRWLRPEALNTTPQEQQKNPELHNLMTNPSFTQTREIAEVPKFNRNPKEQDIPQYSTPLCYSNRANSSSSPTALGLLLQSSVFRELMQKNMNQGKIEEEQEEGSNRFAYLYSSHGNRIPNLQLPEEKALPPQHHRTGQSVWDECFQRI 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01451 376 ProSiteProfiles AP2/ERF domain profile. 166 224 IPR001471 GO:0003700|GO:0006355
Accr9g01451 376 ProSiteProfiles AP2/ERF domain profile. 67 130 IPR001471 GO:0003700|GO:0006355
Accr9g01451 376 CDD AP2 165 226 IPR001471 GO:0003700|GO:0006355
Accr9g01451 376 Gene3D AP2/ERF domain 165 226 IPR036955 GO:0003700|GO:0006355
Accr9g01451 376 Gene3D AP2/ERF domain 66 132 IPR036955 GO:0003700|GO:0006355
Accr9g01451 376 CDD AP2 66 132 IPR001471 GO:0003700|GO:0006355
Accr9g01451 376 SUPERFAMILY DNA-binding domain 66 132 IPR016177 GO:0003677
Accr9g01451 376 FunFam AP2-like ethylene-responsive transcription factor 165 226 - -
Accr9g01451 376 MobiDBLite consensus disorder prediction 43 69 - -
Accr9g01451 376 MobiDBLite consensus disorder prediction 44 66 - -
Accr9g01451 376 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 47 294 - -
Accr9g01451 376 PRINTS Ethylene responsive element binding protein signature 68 79 IPR001471 GO:0003700|GO:0006355
Accr9g01451 376 PRINTS Ethylene responsive element binding protein signature 206 226 IPR001471 GO:0003700|GO:0006355
Accr9g01451 376 Pfam AP2 domain 66 122 IPR001471 GO:0003700|GO:0006355
Accr9g01451 376 Pfam AP2 domain 165 216 IPR001471 GO:0003700|GO:0006355
Accr9g01451 376 SUPERFAMILY DNA-binding domain 165 226 IPR016177 GO:0003677
Accr9g01451 376 SMART rav1_2 166 230 IPR001471 GO:0003700|GO:0006355
Accr9g01451 376 SMART rav1_2 67 136 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01451 Accr-Chr9 23338964 23341461 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01451 42 228 AP2-EREBP Transcription Factor Family AT5G57390 62.632 2.70e-78 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Accr9g01451 AP2 5.5e-07 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01451 - - gmx:100799621 447.588