Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00261 ATGTCCATGTCCCAAGATTATCATCAAGCAGGAATCTTCAGCTTTCCGAATGGATTCGAGAGATCCACTGTAACTCAGCAACCCCAGATCCGGAGAGACAAAGTGAGGGTGCAAGGCTTCGACCCACCACCATCGTTGGTAGGTATTGAGGAAGAGGAATCCGGAGGCCTTCCGGTGTACGAAACCGCCGGGATGTTATCAGAGATGTTTAGTTTCCCACCCACCGGCGCCACATCTTCAGAATTATTGGAACAACAACCCTTGACGGCGACGTATCGATCGTTCAGCAGGCCACAGCAGGCTTCTGCGATGAGCAGTAGTGACTGGTACGGAGACCAACAAGGCATGTTAACTGGCTTGGGAGATTCCAAGAATCACCTCCGTCCTCATCAGCAGCGTCAGATTTCAGGCATTAATGCGGCAGCCATGCAGCTTTTTCTCATGAACCCTCAAACCAGATCGCCTTCTCCTCCTCCTCACAATCCTTCCACTACTTCTTCCACCCTCAACATGTTGCTCCCCAATAATCCTCCCTCTTCTCTCCAAGAATTCCCTGGAACGGGAGGACCTTTTGGTCAATTCACCTGGCTTCCATTTTCTGAAGCAGGTTCTCAAGAAGTTGCAACCAACACCAACCAGAATCCAGGTCAAATGGGAGGGGTTGTGGAAGGCCAAGGTCTTTCTTTATCATTGTCCTCTTCATTAGAAGCAGCAAAAGCCGAGGAACTGAGGATGGGCGGCGATGGCGGCTTTCTTAATTATTACGGAGGGTCCTATCCGTACAAGAATTTGGGTGGAGGTCAAGGTCAAACTCACACATTGCATTTACAGGGAGTAGCGCAGAATAACCACCAAGTCCATGGTGGTTTCGGGTCATCGTTAGGGATTGCGAATGTGCTGAGGAACTCCAAGTATGTGAGGCCTGCTAAAGAATTGCTTGAAGAATTCTGCAACATTGGGAGGGGACAGTTCAAGAAGAACAAATTCACCCGCCACAACTCCAACCCTAATTCCAATTCCGGTGCTGTTGGTGCCGCCGCTTCTTCATCTTCAACAAAAGATCCTCCTCCTTTGTCCGCCGCCGACAGGATGGAGCATCAGAGAAGGAAGGTCAAACTACTATCCATGCTTGACGAGGTGGACCGAAGATACAGTCACTACTGCGAGCAAATGCAAATGGTGGTGAACTCATTTGACTTGGTGATGGGTTTTGGGGCGGCGGTGCCATACACGGCGTTGGCACAGAAAGCAATGTCAAGACATTTCCGGTGCCTGAAGGAGGCCATATCAGCACAACTGAAACACAGTTGCGAGCTGCTGGGTGAGAAAGATGGCTTGGGTTCGTCGGGTTTGACCAAAGGTGAGACCCCAAGGTTGAAGTTGCTTGAACAAAGCCTGAGACAGCAGAGAGCCTTCCACCAGATGGGCATGATGGAGCAGGAGGCTTGGAGACCCCAGCGAGGCCTTCCTGAACGTTCTGTCAACATTTTGAGAGCCTGGCTTTTCGAACATTTCCTCCACCCGTATCCAAGCGATGCAGATAAGCATCTGTTGGCTCGACAGACTGGCCTATCGAGAAATCAGGTATCAAACTGGTTCATTAACGCAAGGGTAAGGTTGTGGAAACCCATGGTAGAGGACATGTATCAGCAAGAGCTCAGAGAAGCTGATGAGGATGCAGAAGAGAGAGAAATGAACCAAAGTAACAACAGCAACAATAGTGGCAACATGGAACAAACTCCAACGCCTACCACCACCACCACTTCAACGGCGTCGGCACCACCTACAACGCCACCAGCCAAAAGATCCGACGTCGTCAATGCCTACGAAAGAGACCCCTCATCACTCGTTGCAATCAATAGACAAGCCCTATCGGAAAACCAAGAAAAGCAACGGTCGTCCACCGCCACCGCATCTGAGGTAGCGCCGCCCGTTTCCCAATGTTTCCGATCAGACCTGCCTCTGCACGGTCATGATGACACGTGTCGGCATGGCAGTGTGGTTGCAGAAGACTGTGGGACCGCCTCGGCCACTGCTAACAATATTGGATCTACTCTCATTAGGTTCGGGACCACCACCGGCGATGTGTCGCTCACCCTAGGGCTACGCCACGCCGGGAACATCCCTGACACCTCTCCTTTCTCAGTTAGAGATTTTGGAGGCATCTGA 2169 0.5113 MSMSQDYHQAGIFSFPNGFERSTVTQQPQIRRDKVRVQGFDPPPSLVGIEEEESGGLPVYETAGMLSEMFSFPPTGATSSELLEQQPLTATYRSFSRPQQASAMSSSDWYGDQQGMLTGLGDSKNHLRPHQQRQISGINAAAMQLFLMNPQTRSPSPPPHNPSTTSSTLNMLLPNNPPSSLQEFPGTGGPFGQFTWLPFSEAGSQEVATNTNQNPGQMGGVVEGQGLSLSLSSSLEAAKAEELRMGGDGGFLNYYGGSYPYKNLGGGQGQTHTLHLQGVAQNNHQVHGGFGSSLGIANVLRNSKYVRPAKELLEEFCNIGRGQFKKNKFTRHNSNPNSNSGAVGAAASSSSTKDPPPLSAADRMEHQRRKVKLLSMLDEVDRRYSHYCEQMQMVVNSFDLVMGFGAAVPYTALAQKAMSRHFRCLKEAISAQLKHSCELLGEKDGLGSSGLTKGETPRLKLLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEDMYQQELREADEDAEEREMNQSNNSNNSGNMEQTPTPTTTTTSTASAPPTTPPAKRSDVVNAYERDPSSLVAINRQALSENQEKQRSSTATASEVAPPVSQCFRSDLPLHGHDDTCRHGSVVAEDCGTASATANNIGSTLIRFGTTTGDVSLTLGLRHAGNIPDTSPFSVRDFGGI 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00261 722 MobiDBLite consensus disorder prediction 204 224 - -
Accr9g00261 722 MobiDBLite consensus disorder prediction 149 187 - -
Accr9g00261 722 CDD homeodomain 483 544 IPR001356 GO:0003677
Accr9g00261 722 SMART HOX_1 483 547 IPR001356 GO:0003677
Accr9g00261 722 MobiDBLite consensus disorder prediction 555 610 - -
Accr9g00261 722 MobiDBLite consensus disorder prediction 204 219 - -
Accr9g00261 722 SUPERFAMILY Homeodomain-like 485 550 IPR009057 -
Accr9g00261 722 MobiDBLite consensus disorder prediction 327 365 - -
Accr9g00261 722 FunFam BEL1-like homeodomain protein 4 486 548 - -
Accr9g00261 722 Pfam Associated with HOX 299 430 IPR006563 -
Accr9g00261 722 MobiDBLite consensus disorder prediction 163 183 - -
Accr9g00261 722 MobiDBLite consensus disorder prediction 329 356 - -
Accr9g00261 722 Pfam Homeobox KN domain 500 539 IPR008422 GO:0003677|GO:0006355
Accr9g00261 722 MobiDBLite consensus disorder prediction 18 32 - -
Accr9g00261 722 ProSiteProfiles 'Homeobox' domain profile. 480 543 IPR001356 GO:0003677
Accr9g00261 722 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 168 570 - -
Accr9g00261 722 Coils Coil 546 566 - -
Accr9g00261 722 Gene3D - 486 548 - -
Accr9g00261 722 MobiDBLite consensus disorder prediction 566 597 - -
Accr9g00261 722 SMART prehox3 294 431 IPR006563 -
Accr9g00261 722 MobiDBLite consensus disorder prediction 18 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00261 Accr-Chr9 2925015 2930527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00261 2 530 Homeobox Transcription Factor Family AT4G36870 50.943 4.75e-143 428
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Accr9g00261 POX 4.3e-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00261 - - jre:108995343 838.95