Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01928 ATGGAAGGTTTCTTTCCCGACAAATTTCTGGACGATGCTTCCTCGGATGAATCTATTGAAAACCAGAATGCTTTTCTTCGGTTTACAGAGATTGAGACTCGCCAAAAAAGCTTTCTTGTCGGATCGAGTTCCCAGAACTCCATTGTTGAAGACCAACCTCCTCCTCCTCCTCCTCCTGCTAAACAAAATGATTTTCTTCAGTATGGTGATTGTCTCAGATCTGGGCTGGGGCAAGAAAGTTCTCAGAATGTGTTGAATTCAAATGAAGGTGCTTTTGTTCAATACAGTGAGGAACCAGAAATAGGATTGGGGCAAGAGAATTCATGTTGCATTAACACGAAAGATCATGGCCATGGGGCTTCCCCTGCTGAAAATCCAAGTGCTTCTGTTCAATACAGAGAACCACCCAGAACAGGGAACGGTCAAGGAAGTTCAAATGCTATGAACATGACAACGGAAATGATTGATTACTTGACAAGAACTTGTTCTGCAGAGAGAAACAACATGGCAGAGTATGAAAGAGATCGAGGTTTCAGGCACATGATTAACGAGAGGATGAGAAGGCAGAGACAGAGGCAGTGTTGCTTGGCCCTGCATTCTATATTACCATTTGGAACAAAGAGCGACGTTAATTCAGTGGTTCAAATGGCAGCTAAGGAGATTCAAAAGCTGGAAGCTTGCAGGGAAGAATTGAAGAGGCAAAATGCAGAGCTTGAAGAAAAACTTAAAGGTGAACAGGGAAACAGAGTTGAGCTGAAGATGGCTCATCCTACATCTCCAATGGAATCAATGCTTGAGACTCTGCAATTATTGACAGAGCTTGGAATGAATACCAGAAGCATCCAATCAAATTTCTCACATGAAGAATTGTTTGCCTCGTTAGAGATTCATGCCAATGAAGAAGCTGGAGTAGAAAGGGAAAATGACAGGAAGCTTCCTTCTCATGACCGATAA 954 0.4266 MEGFFPDKFLDDASSDESIENQNAFLRFTEIETRQKSFLVGSSSQNSIVEDQPPPPPPPAKQNDFLQYGDCLRSGLGQESSQNVLNSNEGAFVQYSEEPEIGLGQENSCCINTKDHGHGASPAENPSASVQYREPPRTGNGQGSSNAMNMTTEMIDYLTRTCSAERNNMAEYERDRGFRHMINERMRRQRQRQCCLALHSILPFGTKSDVNSVVQMAAKEIQKLEACREELKRQNAELEEKLKGEQGNRVELKMAHPTSPMESMLETLQLLTELGMNTRSIQSNFSHEELFASLEIHANEEAGVERENDRKLPSHDR 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01928 317 Coils Coil 214 255 - -
Accr8g01928 317 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 37 296 IPR044658 -
Accr8g01928 317 MobiDBLite consensus disorder prediction 297 317 - -
Accr8g01928 317 Gene3D - 177 253 IPR036638 GO:0046983
Accr8g01928 317 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 171 239 IPR036638 GO:0046983
Accr8g01928 317 SMART finulus 181 230 IPR011598 GO:0046983
Accr8g01928 317 MobiDBLite consensus disorder prediction 124 147 - -
Accr8g01928 317 MobiDBLite consensus disorder prediction 39 66 - -
Accr8g01928 317 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 175 224 IPR011598 GO:0046983
Accr8g01928 317 MobiDBLite consensus disorder prediction 115 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01928 Accr-Chr8 42460703 42462750 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01928 137 296 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G43650 36.747 8.55e-30 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01928 - - pcin:129309902 444.506