Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00344 ATGGATGATTTGATCATCCCTCCTTCTTCCTCTTCCTCTCTTCTCTCTCTCCCCCGAGAATCCCAACCCTCCCTTCAGCAAAAGCTCCAAATCCTCCTCAACAGTCAGCCTGATTGGTGGGTCTACGCCATTTTCTGGCAGATTTCCAACGACGATGTTCATGGAAATCTCCTCCTCTCTTGGGGCGAAGGCCATTTCAATGGCACCAAGGACACCTCCCCTCGTCTCTCCAGTTCCACCACCACCGTCACTCCCCATTACTCAGACAGAACTAGCTTCATGAACAGCACTCACTCTCTCATCAACGATAATTCCCACAACAGCTCCAATATTTGCAGCGACCTCCAAGATACAGAGTGGTTCTACGTCATGTCCTTGACTCGCAACTTCTCTGTTTCCTCCTCTGCTTCTCTCCCCTGCAAAGCCTTAACCTCTGGTTCTCTGCTCTGGCTCAACAGTGACCACGACCTTCAACTTTGCAACTGTGAGAGAGCCAAGGAGGCTTACTTGCACGGAATTGAGACTCTCATCTTCATACCCACCAATCATGGAGTCATCGAGATGGGCTCCACCGATCTTATCCCGGAGAACTGGGCTTTAGCGCAGCAGGTCAAAGCTCTGTTCGGGTCTGACCTCATCGCCAAGCAAACGGCCAGCAACAACCTGATTCAGTTCTTCGATGATCAGAACATTTCCTTCGCCGATATTGGCATTATCGCCGGCGTGCAAGAAGAAGACGACAATTCCCACGAGCCCAACGGGAATAGCAACGCGAGGAATAATTACAGCAAGAGGAAGGTGGGACAGAGGAATAAGGCAAATTCCGGATTCAAGTTCGGGTTTGTGGATTCGGAGTATTCCGATTCAGACGGTAATCCTTCCATAGAGAAAAGAACCCCGAAGAAGAGAGGGAGAAAACCCGGTCTGGGCCGGGAAACGCCGATGAACCACGTGGAGGCAGAGCGGCAGCGACGGGAGAAGCTGAACCACCGATTCTACGCTCTACGCGCGGTGGTTCCGAACGTATCGAGAATGGACAAGGCTTCTCTGTTATCAGACGCTGTGGATTACATCAACGAGCTGAGATCCAAGATCGAGGATCTAGAATCGCAGATTCAGAAAGAAACGACCAACAACAATAACACCAATAAGAAAGTGAAAACGGAAATGGCGGACACCAGCACGGCGGACAACCAGAGCGCGACGACTTCGACGGTGGAGCAAACTACGGTGGTGACGACTTCTTCAGGAGGGGGAAGCGCGACGGGGGTGGAGGTGGAGGTGAGGATGATGGGACCGCAGGCAATGGTGAGGGTCCAATCGGAGAACACGAATCACCCGGGAGCGAGGCTAATGGCGGTGCTGAGAGATTTGGAGCTAGGGGTTCACCATGCGAGCATGTCGTGTGTGAATGAGTTGATGCTTCAAGACGTGGTGGTGAAGATCCCAGAAGATTTCAGAAATGAAGAAAATCTCAAATCTGCCATACTCACTGGTTTGGCTCCCTAG 1509 0.5169 MDDLIIPPSSSSSLLSLPRESQPSLQQKLQILLNSQPDWWVYAIFWQISNDDVHGNLLLSWGEGHFNGTKDTSPRLSSSTTTVTPHYSDRTSFMNSTHSLINDNSHNSSNICSDLQDTEWFYVMSLTRNFSVSSSASLPCKALTSGSLLWLNSDHDLQLCNCERAKEAYLHGIETLIFIPTNHGVIEMGSTDLIPENWALAQQVKALFGSDLIAKQTASNNLIQFFDDQNISFADIGIIAGVQEEDDNSHEPNGNSNARNNYSKRKVGQRNKANSGFKFGFVDSEYSDSDGNPSIEKRTPKKRGRKPGLGRETPMNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVDYINELRSKIEDLESQIQKETTNNNNTNKKVKTEMADTSTADNQSATTSTVEQTTVVTTSSGGGSATGVEVEVRMMGPQAMVRVQSENTNHPGARLMAVLRDLELGVHHASMSCVNELMLQDVVVKIPEDFRNEENLKSAILTGLAP 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00344 502 CDD bHLH_AtAIB_like 310 373 - -
Accr7g00344 502 MobiDBLite consensus disorder prediction 306 324 - -
Accr7g00344 502 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 312 361 IPR011598 GO:0046983
Accr7g00344 502 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 25 208 IPR025610 -
Accr7g00344 502 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 304 373 IPR036638 GO:0046983
Accr7g00344 502 MobiDBLite consensus disorder prediction 253 269 - -
Accr7g00344 502 MobiDBLite consensus disorder prediction 287 324 - -
Accr7g00344 502 MobiDBLite consensus disorder prediction 245 269 - -
Accr7g00344 502 Gene3D - 310 391 IPR036638 GO:0046983
Accr7g00344 502 SMART finulus 318 367 IPR011598 GO:0046983
Accr7g00344 502 PANTHER MYC 20 498 IPR045084 GO:0003700|GO:0006355
Accr7g00344 502 MobiDBLite consensus disorder prediction 390 421 - -
Accr7g00344 502 Pfam Helix-loop-helix DNA-binding domain 316 361 IPR011598 GO:0046983
Accr7g00344 502 Coils Coil 351 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00344 Accr-Chr7 4592755 4594263 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00344 25 501 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00870 33.962 5.58e-72 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr7g00344 bHLH-MYC_N 3.4e-47 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00344 - K13422 pcin:129291555 762.296