Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01494 ATGGAGGCTTGTGGGAGGATTTCTGAAGAGTGGAGTTCTCTTAGTGGATTGTACACAGCTGAGGAAGCTGATTTTATGAATCAACTACTTGATGGTAGCAACTATTCAGTCCCAGAAGAGCTACTATATGGAAATTCAACTTTGGGATTTCCATGTGCGTTTTGGCCTGATCATGAATCAACAGTTGTGAGCGTCACAGGAATCAATAACAACACTTCATATTTTCCCTCCAATGATGCTAATTCCAATGCTCATTTTTTCAGTTTCTCACAAGGCAGTAGCTCCAGTACTGATAGTGGTGTTGTTAGCTACCGCCCTAATCATCCATTGACCAATTTTGATTCTGTGTCTATGGATTTTTCTTTGGGGGATGACAAAATTATCCCATATAGTGTTCAAGGCAATGACCATTTGAACCTTCAGATAAATGAAAATACTGATGAAGATTCAGGTCTTCTTGACCCAGTTGTTAAGAGGGTTATTGCAGTTGCTGATAGGGAATGTGAAGAACTAGTTTCTACTGAACCAGCTGAAAAGGGTAAAAGCACCAATCTAGAGAAGTCAGAGAAAAGGTGTAGGAGCTTATTGGAGGGACAGAAGAACAAGAGGAATGTTAGATCAAGGAAGAATACAAAATATGAATCTATAAGCAAAAATGAAGAGGAGAGGAGCTTTCAGAGGCAGAGCTCGAGCAGTTGCTGCTCAGAGGATGATTCCAATGCTTCTCAGGAGCCAAATGTGGGGTCTACTTCAAGTCTAAGTCCTAAATATTCTGCATCTCTCAAGTCTAATTGCAAATCAATGTCTGCTAAAAGTCCTGCCACTGATCCCCAGAGCGTATATGCAAGAAGAAGAAGAGAAAGAATCAACGAAAGGTTGAAAATCCTACAAAACCTTGTCCCCAATGGAACTAAGGTGGATATAAGCACCATGCTTGAGGAAGCAGTTCAATATGTGAAGTTCTTACAGCTTCAAATAAAGCTTCTGAGCTCTGATGATCTGTGGATGTATGCTCCTATTGCTTACAATGGAATGAACATTGGACTAGACCTTAACATCACACCCACCAAACAACCATAG 1080 0.4056 MEACGRISEEWSSLSGLYTAEEADFMNQLLDGSNYSVPEELLYGNSTLGFPCAFWPDHESTVVSVTGINNNTSYFPSNDANSNAHFFSFSQGSSSSTDSGVVSYRPNHPLTNFDSVSMDFSLGDDKIIPYSVQGNDHLNLQINENTDEDSGLLDPVVKRVIAVADRECEELVSTEPAEKGKSTNLEKSEKRCRSLLEGQKNKRNVRSRKNTKYESISKNEEERSFQRQSSSSCCSEDDSNASQEPNVGSTSSLSPKYSASLKSNCKSMSAKSPATDPQSVYARRRRERINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMNIGLDLNITPTKQP 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01494 359 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 273 322 IPR011598 GO:0046983
Accr1g01494 359 MobiDBLite consensus disorder prediction 171 225 - -
Accr1g01494 359 SMART finulus 279 328 IPR011598 GO:0046983
Accr1g01494 359 Gene3D - 273 330 IPR036638 GO:0046983
Accr1g01494 359 MobiDBLite consensus disorder prediction 226 276 - -
Accr1g01494 359 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 275 338 IPR036638 GO:0046983
Accr1g01494 359 MobiDBLite consensus disorder prediction 171 281 - -
Accr1g01494 359 FunFam Basic helix-loop-helix transcription factor 274 331 - -
Accr1g01494 359 Pfam Helix-loop-helix DNA-binding domain 283 323 IPR011598 GO:0046983
Accr1g01494 359 CDD bHLH_AtIND_like 274 336 - -
Accr1g01494 359 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 97 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01494 Accr-Chr1 43552275 43553762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01494 1 349 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 41.534 1.22e-59 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr1g01494 HLH 3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01494 - - pcin:129292046 493.812