Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1353 ATGGGTTCGATTTCGAAAATTTTTGTTAGTATCTACCATGGGTTTTTGGAAGTGGGCATGGTGGGTAAGGACGATGCACGAAAAATGTTCTGGCGGTCGGCCTCTTGGTCGGCGTCTCGCTCCGCCTCGCACAATCCGGATGGCGAGGAAAAGGACTTCGTAGATCCGGATGGGAGTGTTGGCAATATTAACGGCGAATGCCGTAGGTACCCTCCCGCTCCGTTAACCCCTCGATCGCAGCAAAATTGCAAGGCTCGGTCGTTTTTGCCGCCGTTACAGCCTCTTTCAATTGCCCGGAGGAGCTTGGACGAGTGGCCAAAAGCGAGTTCCGATGATATCGGTGAGTGGACTCATCCCCCAACTCCTAGCGGAAAAGGTAATGGAGAGAGGTTGAAGCTTGATTTATCTTCGATTCAGCGAAACCCTGATAAGAATGCTGGGCTTGTGAAGAGAGATAAGATTGCATGCTTTGATAAAGAATGCTCAAAAGTGGCTGAACATATTTATCTCGGAGGAGATGCTGTTGCTAGGGATAAGGATATATTGAAGCAAAATGGGATTACTCATATTTTGAACTGTGTGGGCTTTGTTTGTCCTGAGTACTTCAAATCTGATTTTGTGTATAGAACGTTGTGGTTGCAGGATAGTCCTTCTGAAGATATTACTAGTATTCTGTACGATGTCTTTGACTACTTTGAAGATGTTAGGGAACAAAATGGAAGGGTATTTGTGCATTGTTGCCAGGGGGTATCTCGGTCCACCTCTCTGGTGATTGCTTACCTTATGTGGAGGGAAGGGCAGAGTTTTGATGATGCTTTTCAGTATGTGAAGGCAGCAAGAGGTATTGCTGATCCTAATATGGGTTTTGCCTGCCAATTACTGCAATGTCAAAAAAGGGTTCATGCGGTTCCACTTAGCCCAAGCTCTTTGCTGAGAATGTATAGAATAGCCCCACACTCACCTTATGATCCACTGCATCTTGTCCCCAAAATGTTGACGAATCCTTCTCCTTGTGCACTGGATTCTAGAGGTGCGTTTATCATACATATACCTGATGCTATATATGTTTGGATTGGGAACGATTGTGAGGCCATTATGGAAAGGGATGCAAGAGGGGCTGTGTGTCAGATTGTTCGCTATGAGAAAGTGCAAGGTTCAATTTCATTAATCAAGGAAGGTGAAGAACCGGATTACTTTTGGGATGCCTTTTCGAAGTTTTTTCCCTTGATGGAAAAATCTGATAATAGAATAGAAAATGGCAAATCAGCCATAAAGATTTCTCCAGGTGAGAGGAGAGTGGACTCATATAATGTTGATTTTGAAGTTTTCCAGAAAGCTATCATGGGAGGTTTTGTGCCACCATTTGCTTCAGCAGAGGATGAACTTGAAACTCACCTTCCTGCTAGGGAGAGCTGTTGGAGTGTGTTAAGGCGTAAGTTTGCCACTGCCAATATGAAGGAATTTGCCTCAGAGCCTAAATTATCATATTCAAAGGTCTATTTGGATTCAGTGTCAGGCACTCATTCATTAATAAATTCATCTCCATCGTCATCTCTGTCATCAACTACGTCTTCTTCTTCATCCCCTTATCTCTCACCAGATTCCATTTCTTCTGATTCAAGCAATAGTTCAAAGAATTCAGAAACATCACTTGATTCTCCATATGCAGCTTCGACTTCTATGCTAGCATCCTCATCTTTATCTAACTTTTCTAACCTGTCCCTCATTTCATCAAGTTGTTCTTCTCAACCAGTAACAAAAGGTGCAGAAACTTGTAGTGTCAAGTTGGCATCACGGCCCTCTCATCAGTCAGCCTCCCTGCTATTGAAAAAACCTTCAACTTCTCTTGCTGAGCGCAGAGGCAGCCTGTCAAAGTCTTTGAAGTTACCACTGATTAGTGATAAAACTTTGGTGATGAATAGATCATCAACTTTTAATGCTACTCGAGAAGATGGTGCTCTCATGAATGGCAACACTAGCTATTTGCATCAATCAGATAATATAGAAAATTCATCTGATTTAAATAATTATGTCAAGGGTAAAGGTTTGGATTCAACTCAACAGTGCAAGGTGTTATTATGTTCAAGTGCTGCAGATAGTATTGACTACAGCAATGCTTCATTTGTTGGAAACTGTAGTGACCCTTGGGTGAGAATCTCTTCAGGAGAAGACATAAAGTCTACTTCATCAAATGAAATAGATGGAAGTGGTCTCCTTCAATCCAATAATAAACGGAATTTAGTCTATCACTGGCCCAGCTTAGAGAAGGTTGTGACATTCAGTGCAAGTGATTTGGATTCTAAAGCAGCTTTTGTCATTTTCTGTTCAAGTGTAAGCTCTGGTAAGAACGCAAGAAACATTTTGTATCTTTGGCTGGGAAGTTCTTTCAGCTTTGCCACATCTCAGGTTCGGTTAGATAGTAACAGAGTGATAGATTGTCGAGGAGAAGTTGACTGGAACCAAGTTGGTTGTGATGTCCTTGCCTATTTTGGTTTGCCAAATGACACTATCATTAAGATTGTTAAAGAGAATGAAGAACCAGAAGAGTTTCTTACCTTACTCAGTACATTGTAG 2574 0.4204 MGSISKIFVSIYHGFLEVGMVGKDDARKMFWRSASWSASRSASHNPDGEEKDFVDPDGSVGNINGECRRYPPAPLTPRSQQNCKARSFLPPLQPLSIARRSLDEWPKASSDDIGEWTHPPTPSGKGNGERLKLDLSSIQRNPDKNAGLVKRDKIACFDKECSKVAEHIYLGGDAVARDKDILKQNGITHILNCVGFVCPEYFKSDFVYRTLWLQDSPSEDITSILYDVFDYFEDVREQNGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARGIADPNMGFACQLLQCQKRVHAVPLSPSSLLRMYRIAPHSPYDPLHLVPKMLTNPSPCALDSRGAFIIHIPDAIYVWIGNDCEAIMERDARGAVCQIVRYEKVQGSISLIKEGEEPDYFWDAFSKFFPLMEKSDNRIENGKSAIKISPGERRVDSYNVDFEVFQKAIMGGFVPPFASAEDELETHLPARESCWSVLRRKFATANMKEFASEPKLSYSKVYLDSVSGTHSLINSSPSSSLSSTTSSSSSPYLSPDSISSDSSNSSKNSETSLDSPYAASTSMLASSSLSNFSNLSLISSSCSSQPVTKGAETCSVKLASRPSHQSASLLLKKPSTSLAERRGSLSKSLKLPLISDKTLVMNRSSTFNATREDGALMNGNTSYLHQSDNIENSSDLNNYVKGKGLDSTQQCKVLLCSSAADSIDYSNASFVGNCSDPWVRISSGEDIKSTSSNEIDGSGLLQSNNKRNLVYHWPSLEKVVTFSASDLDSKAAFVIFCSSVSSGKNARNILYLWLGSSFSFATSQVRLDSNRVIDCRGEVDWNQVGCDVLAYFGLPNDTIIKIVKENEEPEEFLTLLSTL 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1353 857 MobiDBLite consensus disorder prediction 38 60 - -
Acco01g1353 857 SUPERFAMILY Actin depolymerizing proteins 307 416 - -
Acco01g1353 857 Gene3D Severin 311 407 IPR029006 -
Acco01g1353 857 Gene3D Protein tyrosine phosphatase superfamily 141 302 IPR029021 -
Acco01g1353 857 ProSiteProfiles Dual specificity protein phosphatase domain profile. 160 302 IPR020422 GO:0006470|GO:0008138
Acco01g1353 857 SMART dsp_5 160 299 IPR020422 GO:0006470|GO:0008138
Acco01g1353 857 MobiDBLite consensus disorder prediction 107 129 - -
Acco01g1353 857 ProSitePatterns Tyrosine specific protein phosphatases active site. 244 254 IPR016130 GO:0016311|GO:0016791
Acco01g1353 857 PANTHER MKPA PROTEIN 25 854 - -
Acco01g1353 857 Pfam Dual specificity phosphatase, catalytic domain 168 298 IPR000340 GO:0008138|GO:0016311
Acco01g1353 857 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 219 280 IPR000387 GO:0016311|GO:0016791
Acco01g1353 857 CDD DSP 161 295 - -
Acco01g1353 857 MobiDBLite consensus disorder prediction 511 553 - -
Acco01g1353 857 SUPERFAMILY Actin depolymerizing proteins 738 855 - -
Acco01g1353 857 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 153 301 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1353 Acco-ChrAcco01 22957102 22961844 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1353 20 196 Protein tyrosine phosphatase (PTP) family AT3G55270 66.489 5.94e-72 250