Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1403 ATGCCGGCCGTCGAGGGTGAAACACGCTCTACCCTCAGATTATACGAATCCGGCCGAAGTCTTGCCAGATGGCTTCCTAGATCGCACGGCGGAGAAGGGCTTAGTTTGTGGATGGACCCCACAGTTGAAGATCCTGAGCCATATCAATCGGGGGGGTTCATTTCACACGGTGGGTGGAACTCCATCCTGGAGAGTTTGTGGTGTGGTGTACCGATTATGGTGTGGCCTATGTACGCAGAGCAAAAACTCAATGCGTGTAAAATAGTGAGAGAATTGGGATTGGGTGTGGGAGTCACAGAGAATGAGGACTACATTGACGGTCAAGATTTGTTAATGATTTACACGAACGGTGGAGATCTGGTAAAGAGTGAAAAGCTGGAGATAGGAGTGAAGAGGTTGATGGACGGTGATAATGAGGTGAGGAGGAAGGTGAAACAGATGAGTGACACGTTTCGAGAGGCTGTGATGGACGGTGGATCTTCGTTTGTCGTACTGCAACAATTTATTGATGATGTTTTCACCGAAATAAAATAA 534 0.4775 MPAVEGETRSTLRLYESGRSLARWLPRSHGGEGLSLWMDPTVEDPEPYQSGGFISHGGWNSILESLWCGVPIMVWPMYAEQKLNACKIVRELGLGVGVTENEDYIDGQDLLMIYTNGGDLVKSEKLEIGVKRLMDGDNEVRRKVKQMSDTFREAVMDGGSSFVVLQQFIDDVFTEIK* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1403 177 Gene3D Glycogen Phosphorylase B; 51 153 - -
Vvi19g1403 177 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 51 91 IPR002213 GO:0008194
Vvi19g1403 177 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 51 172 - -
Vvi19g1403 177 PANTHER GLYCOSYLTRANSFERASE 51 171 - -
Vvi19g1403 177 Gene3D Glycogen Phosphorylase B; 154 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1403 Vvi-Chr19 23252974 23253507 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g1403 30 172 Glycosyltransferase AT1G07260 45.455 3.70e-36 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1403 - - vvi:100248484 252.677