Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0892 ATGAATCAGCATACTCCAGCACCAAATACACCAGATCCAGGAACCAGAATAGTGACAAAGCAAGCAACACTCCTACGGCAACCTCGCCGAACCAACCCAATGGTATGGTGTTGTGCAATCCTATGTCTAATATTCAGCCTTATTCTCATCTTCTTTGGAATTGCTACTTTGATCATCTTCCTCGTTATTAAACCAAAAACCCCTTTGTTTGACATCCCTGGCGTAAGCCTCAGCAGCGTCTACTTTGACTCACCAGAGTACTTCAATGGTGACTTTACCTTCCTTGCAAATTTCTCAAACCCAAATCGAAAAATCAATGTAAGATTTGAGTATGTGTACATAGAGCTCTACTTTTTTGATAGGCTAATAGGAACTCAAACTCTTGAGCCTTTCACTCAGAGACGAAGAGAAACAAGGTTGGAATCAGTTCATTTTATATCAAGCTTGGTTTCCTTGCCCCCAAATCTGGGGTTGGAGCTCCGAAGGCAGGTGCAGATCAACAAGGTTACATATAACATAAAAGGAACTTTTAGAGTGAGAGCTAATCTGGGATTGACGCACTTCTCTTACTGGTTGCATGGAAGATGCCAGTTAGACATGACCGGGCCACCAACAGGAGTTCTAGTCACCCGAAGTTGCAGAACAAAGAGATGA 654 0.4281 MNQHTPAPNTPDPGTRIVTKQATLLRQPRRTNPMVWCCAILCLIFSLILIFFGIATLIIFLVIKPKTPLFDIPGVSLSSVYFDSPEYFNGDFTFLANFSNPNRKINVRFEYVYIELYFFDRLIGTQTLEPFTQRRRETRLESVHFISSLVSLPPNLGLELRRQVQINKVTYNIKGTFRVRANLGLTHFSYWLHGRCQLDMTGPPTGVLVTRSCRTKR* 218
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0892 217 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 23 208 - -
Vvi19g0892 217 Pfam Late embryogenesis abundant protein 99 196 IPR004864 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi19g0892 Vvi-Chr19 10331314 10331967 Dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0892 - - vvi:100249744 424.861