Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0887 ATGTACAAGAAAGCAAAATCAAATTTGGAAGCTTTAGAGAAGCTGGGAGCATCTCTTTTATTTGGAGTGGATGCAACCAAGATGAAGCTTCATATTGGTCTCAAGATGCGGAAATTCGACCGCATTATATATAACTTTCCTCATGCAAGCTTCCATGGAAAGGAAGACAATAGGCTTATGATTAAAAAACGTATTGTTGTTATGGATATGATATGTAGCTTGAATTTCATAGTACAATCTTCCATACATTGTAGTTGCTCTATGCATAGGGATCTTGTGCATGGTTTCTTCAGGAATGCAAGTGGCATGCTAAGAGCCAATGGTGAAATTCATGTAAATCACAAAACCACAGCTCCATTTTCCCACTGGAATCTTGAGGAACTTGCTTCTCAAAACTCTCTGGTGTTGTTTGAGTGTGTTGATTTTAAGAAAGAGGACTACCCAGGCTATAACAATAAGAGAGGAGCTGGTTCAAGATGTGATGAGCCCTTCCGTTTGGGAGCTTGCAGTACTTTCAAATTCAGATTCTCCCCCACTGCTATGAAAATGTCCAGAATCGTGTGCCACTGTTGA 573 0.3979 MYKKAKSNLEALEKLGASLLFGVDATKMKLHIGLKMRKFDRIIYNFPHASFHGKEDNRLMIKKRIVVMDMICSLNFIVQSSIHCSCSMHRDLVHGFFRNASGMLRANGEIHVNHKTTAPFSHWNLEELASQNSLVLFECVDFKKEDYPGYNNKRGAGSRCDEPFRLGACSTFKFRFSPTAMKMSRIVCHC* 191
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0887 190 PANTHER PHENYLALANYL-TRNA SYNTHETASE 3 178 - -
Vvi19g0887 190 Pfam rRNA (uridine-N3-)-methyltransferase BTM5-like 2 154 IPR019446 GO:0070042|GO:0070475
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi19g0887 Vvi-Chr19 10275873 10282017 Proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0887 - - vvi:104877675 330.872