Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0886 ATGGGTCAAATTCTCTCCGTTATTATTCGCTGGTTGTGGGGTGAAAAAGATGATAAAAAGAAGCCAAGTGAAAAACTACCCCTGATTTCTCCGCCGAGATTTGCCTCAGACACCAATTCTTCAAGCTCAAGGCCTGCGTTGCCACCGAATCCATTTACTTCTCCACCGAGCTTAGAATCATGTAGGGACTACGCATTGCAGACAAATCTACGGACTCATCCTCCGCCTCCAGTGAGCTCTAGCTCTAACTCTAGCTCTAGCCCATTCAGGCACTCCAAAACAAGTAGTGCATCACGTCTTCAGCCAACACTACAGACTCATCATCAACTAAACTCGAGCTCATGTGGCTTCTCTATCGCGACTGTATCATCCCCTGTCCAGCCAAAACTAGAGACTCCCCAACAACTAAGTTCTAGCTCATGCAGCCAATCCAGCACAACCCAATTTTACCCAAAACTAGTGCAGACTCATCAGCCACTCAACTTGAGCTCATGTGGCCTCTCCAGCACGACTGTATCATCCCCTGTCCAACCAAAACTAGAGACTCACCAACAGCTAGGTTCTAGCTCATGCAGCCAATCCAGCACAACCTCTTTTTACCCAAAACCAGTGCAGACTCCTCAGCCACTCAGCTCCAACTCGTGTGGCCTATCCAGGCCAAGTGGTACTTCTCATGCTCAGCCAAAGATACAGACTCATCCTTCACTACTCTCTAGCTCCTCCAGCCACTCTAGCGTGAGTGGTGCATCCCATTTCCAGCCAAATCCAGTGACTCTTCCACTGAGCTCTGTCCCAAGCAGCAACTCAGGCATCAATGGTGCATCGCAGCGAAACTCTCTGGGTTTTCCACTGAGCTTGGAATCACGCAGCAATTCCAGGTCTGATGATGCATTGGATCTGTTAATTCCTGCAAAATTTAAAGTCGAAGTTGTAGGTGATGAGAAGCAAGTTTCTGCACGGCTCCACCATTACGACATAATTGAAGAAAACGAAGAACGAACCAGAGGAGCGGTAGGAAAAAATTGGTGGGACTACAGCAGCTGTGAAGAAGACCTAGAGGAAGGAAAGCTTGGAGTAAGATGGATAAAGCACTACAGCAGTAAATACAAAATATTGCTGGTGGGTGAAGGGGACTTCTCATTCTCTGCGTCTTTGGCTGTGGCTTTTGCTTCTGCTACAAACATAACCGCTACTTCTCTTGATTCTATAGAGTTTTTGAGCACAAACTATAGGCATGCCTTGTCCAACATCGATTCACTACGGAGCTTGGGAGCTAAGGTCATGCATGATGTTGATGCCACCAAAATGGCACACGTTTTCCCATTCAATTGCATGCGTTTTGATCGAGTTGTCTACAACTTCCCGCTGGCTGGATTTTTTCCCAATGCATCTAGGGAAGATAAGATCCGGCGAAATCAAATGCTGGTACAGCTGTTTTTAGAAAATGCTAAGAAGATGATTCACATAGATGGAGAAATCCACATTACTCACAAAAGCAATGGCTTCTTTTATGAGTGGAATTTGGAATTTCTAGCCTCAAGAGTTGGGCTTCGACTTATAGAAGAAGAGCCCTTTAATTTTATGGACTACCCAGGGTACCGCACCAAGTATGGCTTTGGGGGTGACAATAACTTCAACTGCAATCCCAGCAGAACATACAAATTTGGGCATAAAAAACTGAATGAGAATGTGTGGATGTGA 1701 0.4591 MGQILSVIIRWLWGEKDDKKKPSEKLPLISPPRFASDTNSSSSRPALPPNPFTSPPSLESCRDYALQTNLRTHPPPPVSSSSNSSSSPFRHSKTSSASRLQPTLQTHHQLNSSSCGFSIATVSSPVQPKLETPQQLSSSSCSQSSTTQFYPKLVQTHQPLNLSSCGLSSTTVSSPVQPKLETHQQLGSSSCSQSSTTSFYPKPVQTPQPLSSNSCGLSRPSGTSHAQPKIQTHPSLLSSSSSHSSVSGASHFQPNPVTLPLSSVPSSNSGINGASQRNSLGFPLSLESRSNSRSDDALDLLIPAKFKVEVVGDEKQVSARLHHYDIIEENEERTRGAVGKNWWDYSSCEEDLEEGKLGVRWIKHYSSKYKILLVGEGDFSFSASLAVAFASATNITATSLDSIEFLSTNYRHALSNIDSLRSLGAKVMHDVDATKMAHVFPFNCMRFDRVVYNFPLAGFFPNASREDKIRRNQMLVQLFLENAKKMIHIDGEIHITHKSNGFFYEWNLEFLASRVGLRLIEEEPFNFMDYPGYRTKYGFGGDNNFNCNPSRTYKFGHKKLNENVWM* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0886 566 PANTHER PHENYLALANYL-TRNA SYNTHETASE 331 558 - -
Vvi19g0886 566 MobiDBLite consensus disorder prediction 18 107 - -
Vvi19g0886 566 Pfam rRNA (uridine-N3-)-methyltransferase BTM5-like 372 536 IPR019446 GO:0070042|GO:0070475
Vvi19g0886 566 MobiDBLite consensus disorder prediction 166 275 - -
Vvi19g0886 566 MobiDBLite consensus disorder prediction 33 47 - -
Vvi19g0886 566 MobiDBLite consensus disorder prediction 56 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0886 Vvi-Chr19 10267544 10269535 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0886 K19307 - vvi:104877639 1070.84