Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0883 ATGCCCCTCCCAAGCTCCATCGCTCACAAACGAGACAATCCCACTGCTTGCAGCATCCAGAAAGCGTCAATGGCTGTCGGGGAGGAAATGGTGAAAGATGAAGTGGGTGTGGAAGAACAAGAGAAACGGTTGATGCATTATTCCTCGTTTCATCAAATTCTCTTGCTTCTACATGTTGATGGACAAAGTCTCCATCACAAAAGCCAGGGCAGCAAAGGATTGAACTGGGGGGGTGGGGGGGGTATGCATAGGGATCTTGTGCATGGTTTCTTCAGGAATGCAAGTGGCATGCTAAGAGCCAATGGTGAAATTCATGTAAATCACAAAACCACAGCTCCATTTTCCCACTGGAATCTTGAGGAACTTGCTTCTCAAAACTCTCTGGTGCTGTTTGAGTGTGTTGATTTTAAGAAAGAGGACTACCCAGGCTATAACAATAAGAGAGGAGCTGGTTCAAGATGTGATGAGCCCTTCCGTTTGGGAGCTTGCAGTACTTTCAAATTCAGATTCTCCCCCACTGCTATGAAAATGTCCAGAATCGTGTGCCACTCTGATTTAAATCACCGAGGATCTCAGCAAATTAATCTAATGCAAATGCAGCAGTGTCCAGGTTCATCTGATTACAGAGGTCCTGGAAGAAATATTTTAGCAAATATGAATGGCATCCCAAGGCATATGGGGTTACCTTTAACAATCTCTGTCAGCAATGAATGGATCTTTGATGGATACTTCAATCATGCTGTGGAAACATTTGGAAGAACTGGTTACGATATGGGCTATACTATTCATGAAGCACTTAGGCTTAGCTTTGAAAGATATATGGCTGAAGGTCCAGGAAGAACCTTGACTGGTTACATAAACCTTCTGCAAGAGCTTCAACATTTGAGCAGGTTGAGATCAGCATTCCTACAAAGGATGTTATTGGGTCCTGATCACTACTTGTAA 945 0.437 MPLPSSIAHKRDNPTACSIQKASMAVGEEMVKDEVGVEEQEKRLMHYSSFHQILLLLHVDGQSLHHKSQGSKGLNWGGGGGMHRDLVHGFFRNASGMLRANGEIHVNHKTTAPFSHWNLEELASQNSLVLFECVDFKKEDYPGYNNKRGAGSRCDEPFRLGACSTFKFRFSPTAMKMSRIVCHSDLNHRGSQQINLMQMQQCPGSSDYRGPGRNILANMNGIPRHMGLPLTISVSNEWIFDGYFNHAVETFGRTGYDMGYTIHEALRLSFERYMAEGPGRTLTGYINLLQELQHLSRLRSAFLQRMLLGPDHYL* 315
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0883 314 Pfam rRNA (uridine-N3-)-methyltransferase BTM5-like 82 148 IPR019446 GO:0070042|GO:0070475
Vvi19g0883 314 PANTHER PHENYLALANYL-TRNA SYNTHETASE 46 172 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi19g0883 Vvi-Chr19 10169773 10172421 Proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0883 - - vvi:109121855 490.345