Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0882 ATGGGTCAAATTCTCTCCGTTATTATTCGCTGGTTGTGGGGTGAAAAAGATGATAAAAAGAAGCCAAGTGAAAAACTACCCCTGATTTCTCTGCCGAGATTTGCCTCAGACACCAATTCTTCAAGCTCAAGGCCTGCGTTGCCACCGAATCCATTTACTTCTCCACCGAGCTTAGAATCATGTAGGGACTACGCATTGCAGACAAATCTACGGACTCATCCTCCGCCTCCAGTGAGCTCTAGCTCTAACTCTAGCTCTAGCCCATTCACCCACTCCAAAACAAGTAGTGCATCACGTCTTCAGCCAACACTACAGACTTATCATCAACTAAACTCGAGCTCATGTGGCTTCTCTATCGCGACTGTATCATCCCCTGTCCAGCCAAAACTAGAGACTCACCAACAACTGAGTTCTAACTCATGCAGCCAATCCAGCACAACCCATTTTTACCCAAAACTAGTGCAGACTCATCAGCCACTCAACTTGAGCTCATGTGGCCTCTCCAGCACGACTGTATCATCCCCTGTCCAACCAAAACTAGAGACTCACCAACAGCTAAGTTCTAGCTCATGCAGCCAATCCAGCACAACCCATTTTTACCCAAAACCAGTGCAGACTCCTCAGCCACTCAGCTCCAACTCGTGTGGCCTATCCAGGCCAAGTGGTACTTCTCATGCTCTGCCAAAGATACAGACTCATCCTTCACTACTCTCTAGCTCCTGCAGCCACTCTAGCGTGAGTGGTGCATCCCATTTCCAGCCAAATCCAGTGACTCTTCCACTGAGCTCTGTCCCAAGCAGCAACTCAGGCATCAGTGGTGCATCGCAGCGAAACTCTCTGGGTTTTCCACTGAGCTTGGACTCACGCAGCAATTCCAGGTCTGATGATGCATTGGATCTGTTAATTCCTGCAAAATTTAAAGTCCAAGTTGTAGGTGATGAGAAGCAAGTTTCTGCACGGCTCCACCATTACGACATAATTGAAGAAAACGAAGAACGAACCAGAGGAGCGGTAGGAAAAAATTGGTGGGACTACAGCAGCTGTGAAGAAGACCTAGAGGAAGGAAAGCATGGAGTAAGATGGATAAAGCACTACAGCAGTGAATACAAAATATTGCTGGTGGGTGAAGGGGACTTTTCATTCTCTGCGTCTTTGGCTGTGGCTTTTGCTTCTGCTACAAACATAACCGCTACTTCTCTTGATTCTATAGAGTTTTTGAGCACAAACTATAGGCATGCCTTGTCCAACATCGATACACTATGGAGCTTGGGAGCTAAGGTCATGCATGATGTTGATGCCACCAAAATGGCACACGTTTTACCATTCAACTGCATGCGTTTTGATCGAGTTGTCTACAACTTCCCGCTGGCTGGATTTTTTCCCAATGAATCAAGGGAAGATGAGATCCGGAGAAATCAAATGCTGGTACAGCTGTTTTTAGAAAATGCTAAGAAGATGATTCACATAGATGGAGAAATCCACATTACTCACAAAAGCAATGGCTTCTTTCGTGAGTGGAATTTGGAATTTCTAGCCTCAAGAGTTGGGCTTCGACTTATAGAAGAAGTGCCCTTTAATTTTAGGGACTACCCAGGGTACCGCACCAAGTATGGCTTTGGGGGTGACAATAACTTCAACTGCAATCCCAGCAGAACTTACAAATTTGGGCATAAACGTTGA 1680 0.4601 MGQILSVIIRWLWGEKDDKKKPSEKLPLISLPRFASDTNSSSSRPALPPNPFTSPPSLESCRDYALQTNLRTHPPPPVSSSSNSSSSPFTHSKTSSASRLQPTLQTYHQLNSSSCGFSIATVSSPVQPKLETHQQLSSNSCSQSSTTHFYPKLVQTHQPLNLSSCGLSSTTVSSPVQPKLETHQQLSSSSCSQSSTTHFYPKPVQTPQPLSSNSCGLSRPSGTSHALPKIQTHPSLLSSSCSHSSVSGASHFQPNPVTLPLSSVPSSNSGISGASQRNSLGFPLSLDSRSNSRSDDALDLLIPAKFKVQVVGDEKQVSARLHHYDIIEENEERTRGAVGKNWWDYSSCEEDLEEGKHGVRWIKHYSSEYKILLVGEGDFSFSASLAVAFASATNITATSLDSIEFLSTNYRHALSNIDTLWSLGAKVMHDVDATKMAHVLPFNCMRFDRVVYNFPLAGFFPNESREDEIRRNQMLVQLFLENAKKMIHIDGEIHITHKSNGFFREWNLEFLASRVGLRLIEEVPFNFRDYPGYRTKYGFGGDNNFNCNPSRTYKFGHKR* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0882 559 PANTHER PHENYLALANYL-TRNA SYNTHETASE 335 556 - -
Vvi19g0882 559 Pfam rRNA (uridine-N3-)-methyltransferase BTM5-like 372 536 IPR019446 GO:0070042|GO:0070475
Vvi19g0882 559 MobiDBLite consensus disorder prediction 56 101 - -
Vvi19g0882 559 MobiDBLite consensus disorder prediction 33 47 - -
Vvi19g0882 559 MobiDBLite consensus disorder prediction 31 101 - -
Vvi19g0882 559 MobiDBLite consensus disorder prediction 166 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0882 Vvi-Chr19 10156516 10158496 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0882 K19307 - vvi:104877638 1026.54