Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01081 ATGCTACCGTCTGTTGATGAACTTGGCACACCAAAACAACCAAGGAATCAACAATCTCTGCGATCAGAATCATCAAATTCCCTTGCCAGCACAAGAGCAATTCTTGGACAACCTCGACTTCAAAGGACAAAACCTATCATATGGTGTGCTGCAATACTGTGCTTAATATTCAGCCTCGTACTCATCTTCTTTGGAATTGCAATACTGATCCTCTACCTAGCCATGAAGCCAAGAAATCCCACTTTTGACATTCCCAATGCAAGCCTCAATGTAGTGTACTTTGACTCACCACAGTACCTCAACGGTGAGTTCACTCTCCTTGCAAACTTCTCCAATCCTAACAGAAGAATCGGGGTGAGGTTTGAGTCCTTGAACATCGAGCTTTTCTACTCGGACAGGTTGGTATCATCACAGAGAGTAAAGCCTTTCACTCAGAGGCCAAGGGAAAACAGTTTGCAATCAGTGAACTTGATATCCAGCTTAGTGTTTTTGCCTCAAGATGTTGGTGTAAAGCTTCAAAGGCAAGTGGAAAATAACAGGATCAATTACAATGCAAGAGGAACTTTTAAAGTGAGGTTCAATATTGGCCTTATCCATTTATCTTACTGGCTGCATACCATATGCCAGATAGAGATGACTAGTCCTCCAACTGGTATTCTTCTGGCCAGACAGTGCATAACAAACAGATCAAGATGA 696 0.4239 MLPSVDELGTPKQPRNQQSLRSESSNSLASTRAILGQPRLQRTKPIIWCAAILCLIFSLVLIFFGIAILILYLAMKPRNPTFDIPNASLNVVYFDSPQYLNGEFTLLANFSNPNRRIGVRFESLNIELFYSDRLVSSQRVKPFTQRPRENSLQSVNLISSLVFLPQDVGVKLQRQVENNRINYNARGTFKVRFNIGLIHLSYWLHTICQIEMTSPPTGILLARQCITNRSR 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01081 231 Pfam Late embryogenesis abundant protein 111 201 IPR004864 -
Vian7g01081 231 MobiDBLite consensus disorder prediction 1 25 - -
Vian7g01081 231 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 18 220 - -
Vian7g01081 231 MobiDBLite consensus disorder prediction 10 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01081 Vian-Chr7 19040498 19041193 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01081 - - pvu:PHAVU_008G282100g 416.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01081 7 19040498 19041193 Vian7g01081 7 19040498 19041193 ECH
Vian6g00525 6 20523740 20524501 Vian7g01081 7 19040498 19041193 PCT