Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2335 ATGACCTCCGTATGCATATCTAACTGTGTAAACGACGCACGTGACCCACGTGTGCCGGTTCGAGCCACGTACGTGAATCTCTACAAGTGGCCGGAATCGGACGCGGAGTTTGTGAGGTCGATGTACCTAAGAAGCTACAAATTTTCGAGGAAAGAGACGGTGCCGGAGAAAACGCAGAAATGTTTCGGGAGGGTGAAGGAGAGAGTGAAGGGAAGGTCTCATGTGGGTAGCGGTAATAGGAGAAGGAAGTGTTTGGTTTGGAGGAAAATGAGGGAAATCTCGTGCGCTGCGTTGTTTAGGATTTTCCACAGGTTCTTGTCTTGCGGCGCTAGTGTAGATGTTGTCGATGCAAAATCTTGA 360 0.4944 MTSVCISNCVNDARDPRVPVRATYVNLYKWPESDAEFVRSMYLRSYKFSRKETVPEKTQKCFGRVKERVKGRSHVGSGNRRRKCLVWRKMREISCAALFRIFHRFLSCGASVDVVDAKS 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2335 119 PANTHER OS05G0120300 PROTEIN-RELATED 1 41 - -
Ssu7g2335 119 PANTHER OS05G0120300 PROTEIN-RELATED 39 118 - -
Ssu7g2335 119 PANTHER - 1 41 - -
Ssu7g2335 119 PANTHER - 39 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2335 Ssu-Chr7 45926410 45926836 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2335 - - gmx:100802203 205.682
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1088 4 17291152 17291589 Ssu7g2335 7 45926410 45926836 PCT
Ssu7g2335 7 45926410 45926836 Ssu4g0681 4 10680410 10707208 PCT