Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3609 ATGTCTGCCTTTGTTGGAAAGTATGCAGATGAGCTTATCAAGAATGCCAAGTACATAGCCACAGCTGGGAAGGGCATCTTGGCGGCAGATGAGAGCACTGGCACCATCGGGAAGCGTCTGGCCAGCATTAACGTTGAGAACATCGAAGCCAACCGCCAAGCCCTTCGCGAGCTTCTCTTCACCTCTCCAGATGCCCTCCAACACCTCTCTGGTGTCATCCTCTTTGAGGAAACTCTTTACCAGAAGACCATTGATGGGAAGCCTTTTGTTGAGGTCCTTCAAGAGAACAATGTCATCCCAGGCATCAAAGTGGACAAGGGTGTCGTTGAGTTGGCTGGCACAAACGGGGAAACCACCACCCAAGGCCTTGACTCTCTTGGAGCTCGGTGCCAGCAGTACTACAAGGCCGGTGCACGCTTTGCCAAGTGGCGTGCAGTCCTCAAAATTGGCCCCAGTGAGCCCTCTGAGCTGTCCATCCAGCAAAATGCACAGGGCTTGGCTCGCTATGCCGTCATTTGCCAGGAGAATGGGCTTGTGCCCATTGTTGAGCCTGAGATTTTGACTGATGGGGCTCATGACATCACCAAATGTGCTGCTGTCACTGAAACTGTGCTTGCAGCTGTTTACAAGGCACTGAATGAGCATCATGTCCTTCTTGAAGGAACCCTTCTCAAGCCCAACATGGTTACTCCCGGCTCTGATAGCCCAAAGGTACCACCTGAGGTGATTGCTGAGTACACAGTTCAAGCACTGCGCAGGACTGTCCCAGCTGCGGTGCCAGGGATTGTGTTTCTGTCTGGGGGGCAAAGTGAGGAAGAAGCTACGCTCAACCTGAATGCAATGAACAAGTTGGAGGTGTTGAAGCCATGGACTCTCTCATTCTCGTTTGGGCGAGCCTTGCAGCAAAGCACACTCAAGACATGGGCCGGAAAGAAGGAGAATGTTGCCAAAGCTCAAGCGGCAGTTTCTGGCAAGATGCAAGGCCAATTCTGA 993 0.5247 MSAFVGKYADELIKNAKYIATAGKGILAADESTGTIGKRLASINVENIEANRQALRELLFTSPDALQHLSGVILFEETLYQKTIDGKPFVEVLQENNVIPGIKVDKGVVELAGTNGETTTQGLDSLGARCQQYYKAGARFAKWRAVLKIGPSEPSELSIQQNAQGLARYAVICQENGLVPIVEPEILTDGAHDITKCAAVTETVLAAVYKALNEHHVLLEGTLLKPNMVTPGSDSPKVPPEVIAEYTVQALRRTVPAAVPGIVFLSGGQSEEEATLNLNAMNKLEVLKPWTLSFSFGRALQQSTLKTWAGKKENVAKAQAAVSGKMQGQF 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3609 330 Pfam Fructose-bisphosphate aldolase class-I 11 323 IPR000741 GO:0004332|GO:0006096
Ssu6g3609 330 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 5, CYTOSOLIC-RELATED 1 324 - -
Ssu6g3609 330 Coils Coil 38 58 - -
Ssu6g3609 330 Gene3D Aldolase class I 1 328 IPR013785 -
Ssu6g3609 330 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 1 324 IPR000741 GO:0004332|GO:0006096
Ssu6g3609 330 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 217 227 IPR029768 -
Ssu6g3609 330 CDD FBP_aldolase_I_a 9 321 - -
Ssu6g3609 330 SUPERFAMILY Aldolase 3 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3609 Ssu-Chr6 79773456 79775267 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g3609 1 322 Miscellaneous Gene Families AT3G52930 81.366 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3609 K01623 - gmx:100792394 607.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3609 6 79773456 79775267 Ssu6g3609 6 79773456 79775267 ECH