Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1088 ATGACCTCAGTTTGCATATCCAACTGCATCAACGATGCACGTGACCCACGTGTCCCCGTGAGGGCCACCTACGTCAACCTCTACAAGTGGCCGGAATCGGATGCTGAGTTTGTGAGGTCAGTGAGCTGCAACAGAGAAAAGGGTTCGCAAATGTACGGCCACCCCAGGGTGGTGGACAGCATCTCCTGCAGGCAGATGTACCTCAGAAGCTACACCTTTTCCAGGGAAGAAGAGAACGTGCCCGAGAAAACCCACAAATGTTTTGGTAGggtgaagatgaagaagaaacatGAGAACAACACAAAGCCTGAGGCTAGGAAAACCAAGTGTTTGGTTTGGAGTAAGGCTAAGGAGATCTCCTGTTCTGCTTTGTCTAGGATTTTCCGAAGGGTCTTGTCCTGCTCCTCTAGTGTAGATGTCGTGGAcgaaaaatattga 438 0.4703 MTSVCISNCINDARDPRVPVRATYVNLYKWPESDAEFVRSVSCNREKGSQMYGHPRVVDSISCRQMYLRSYTFSREEENVPEKTHKCFGRVKMKKKHENNTKPEARKTKCLVWSKAKEISCSALSRIFRRVLSCSSSVDVVDEKY 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1088 145 PANTHER - 1 145 - -
Ssu4g1088 145 PANTHER OS05G0120300 PROTEIN-RELATED 1 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1088 Ssu-Chr4 17291152 17291589 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1088 - - gmx:100527315 249.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1088 4 17291152 17291589 Ssu4g1088 4 17291152 17291589 ECH
Ssu4g1088 4 17291152 17291589 Ssu7g2335 7 45926410 45926836 PCT