Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00006 ATGCTTGCCCTTCCACCCCCACCTCCTCCTCCACCCCTAGCCACAAGAAAACAAACCAAGCAAGTCTCTCCTGACCAAATTTTCATATCAAAACACCCCATCAAGCAACATTCTCAAGAACCAGAAGCACCAAATCATGTTCCAACAAAGTCAATTAGGCCACCACCACCAACACTAAGACAGCCTCCATTTCAAAGGACTAACCCCATCATATGGTTTGCTGCAGTGTTGTGCCTCATATTCAGCGTTATGCTTATCTTCTTTGGAGTTTTAACTTTGATCATCTTCCTAGGCATCAAACCAAGGAACCCCACTTTTGACATCCCCAATGCAAACCTTAATTCAGTGTACTTTGACTCCCCAGAATCCTTAAACGGTGACTTCACCCTCCTTGCAAACATCACCAACCCCAACAGGAAAATTGATGTGAGATTTGAGTCCTTGGATGTTGAACTTTTCTTTTCAGACAGGGTCATATCAACACAGTCCATTCAGCCCTTTACTCAGAGGAGAAGGGAGAGCAGGTTGGAATCATTGCACTTCATATCCAGCTTGGTCTTTTTGCCTGAGAATCTTGGTGTGAACCTAAAAGGACAGGTTCAGGGCAACAGGGTCATGTACAATGTAAGAGGAACCTTTAAAGTGAGAGCAACTATGGGTTTCTTCCATTTGTCTTACTGGTTGCATAGCAGATGCCAGATAGAGATGACTGGTCCACCAACTGGCGTCTTGGTAGCTAGGAAGTGCATCACCAAGAGATGA 762 0.4475 MLALPPPPPPPPLATRKQTKQVSPDQIFISKHPIKQHSQEPEAPNHVPTKSIRPPPPTLRQPPFQRTNPIIWFAAVLCLIFSVMLIFFGVLTLIIFLGIKPRNPTFDIPNANLNSVYFDSPESLNGDFTLLANITNPNRKIDVRFESLDVELFFSDRVISTQSIQPFTQRRRESRLESLHFISSLVFLPENLGVNLKGQVQGNRVMYNVRGTFKVRATMGFFHLSYWLHSRCQIEMTGPPTGVLVARKCITKR 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00006 253 MobiDBLite consensus disorder prediction 1 15 - -
Spst6g00006 253 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 7 244 - -
Spst6g00006 253 MobiDBLite consensus disorder prediction 1 60 - -
Spst6g00006 253 Pfam Late embryogenesis abundant protein 133 232 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00006 Spst-Chr6 350999 351760 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00006 - - gmx:100803431 430.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00006 6 350999 351760 Spst8g01009 8 8760933 8761622 PCT