Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02341 ATGGCTCTTTTTGTGTATCTTGTGCTTTTCCTAGCCCTGGTCCATCATTCAAGTGCTCTTTACTGTTTATGCAAAGATGGTGTTGGTGATCAAGCCCTTCAGAAAGCAATAGATTATGCTTGTGGAGCTGGAGCTGACTGTACCCCTATTCTCCAAAATGGAGCTTGTTACCAACCCAACACTGTGAAGGATCACTGTAACTATGCAGTTAATAGCTATTACCAGAGAAAGGGTAATGCTGCAGGAACCTGTGATTTTGCAGGTGCTGCCACAACCAGTACAAATCCACCTACTACATCATCTGGATGTGTCTACCCCTCAAGCCCTAGCAATGCAGGAACAACACCATCAACTGGTTCACCACCTGGTACAACCCCATCAGCAGGTACAACTCCAAGCACAAGCATAACTCCTGGTGCTCCTAACACATTTGGAATAAGTCCAACATCTACAACTGGTTTCAATAATGGAGCTAATTTGGGAGGCACCAACTCTGAGATGCTTTTGCTCTTTCTGCTAACCATGTGCTTAGCCATCAGGATCTAG 546 0.4505 MALFVYLVLFLALVHHSSALYCLCKDGVGDQALQKAIDYACGAGADCTPILQNGACYQPNTVKDHCNYAVNSYYQRKGNAAGTCDFAGAATTSTNPPTTSSGCVYPSSPSNAGTTPSTGSPPGTTPSAGTTPSTSITPGAPNTFGISPTSTTGFNNGANLGGTNSEMLLLFLLTMCLAIRI 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02341 181 Gene3D - 15 112 - -
Spst3g02341 181 MobiDBLite consensus disorder prediction 93 149 - -
Spst3g02341 181 FunFam Glucan endo-1,3-beta-glucosidase 4 15 109 - -
Spst3g02341 181 Pfam X8 domain 21 91 IPR012946 -
Spst3g02341 181 PANTHER BETA-1,3 GLUCANASE 8 123 IPR044788 -
Spst3g02341 181 SMART X8_cls 20 105 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02341 Spst-Chr3 67060627 67062368 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02341 21 98 Glycoside Hydrolase AT2G01630 45.570 2.27e-21 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02341 - - gmx:100811705 221.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02341 3 67060627 67062368 Spst3g02341 3 67060627 67062368 ECH
Spst3g02341 3 67060627 67062368 Spst2g01671 2 15671260 15672918 PCT