Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00683 ATGGAAAAAAATGTATCTTCGCGATGGACATACCATGTTTTCCTAAGTTTTACAAGAAATGAAGGCAGCCATTTAGAATTTACTCGTCACTTAATTGCTTCGTTGGAGAGAAAGGGAATCACGACTTTCCCATATGACAGAGATCATCATTATGTGACTTTGCAAGAACTCCATAAAGCAATTGAGGAGTCCCTCGCTGTTATTGTTGTTTTATCCGAGAACTATGCTTCTTCAACTTTGTGTCTGGATGAACTAGAAAAGATTATTCTTGAATCAGAGAGGGTGGCGGGAAGAGAAGTTTTTCCTGTCTTCTATAACGTCACTCCTGCGGACGTTCGATACCAGATAAGTGGTTTTGGTGAGGCTTTTAGCAAACACGCAGCAAGTTCTGAAGAAGATAAAAGAAAGGTGCAGAAATGGAGAGAGTCCTTACAACAAGTTACGGGTATTTCTGGCTGGGCCTGGGAATCCAAGAATAGGCATAAGGAAGAGCTCATTGAAGACATTATTACATCGGTATGGACAAAGATACATCCCAAAATTCCAATAAACAATGATGGACTAGTTGGAATTGATTACAAAGTTAGAAAAATGCAATCACTTTTAAGAATAGAATTGAAGGACGTTCGTTTCATAGGAATATGGGGCATGGGTGGCATAGGAAAGACAACTCTAGCAAGAGTTGTATTCAACAAAATTCGTAACAAATTTGATGTTAGTTGCTTTCTTCACAATGTTAGGAAGATTTGTGATGAAACAGATGGTATGCTTAGACTACAAAGAACACTTATTTCCCATCTAAAACTAGAAGGCTTGGAAATTGAAGATTTGGGCGAAGGAAAGAGTAAGATACAAGAGGTATTGTTCAACAAAAGAGTTCTCCTCGTGATTGACGATGTTGATGATGTGAGACACTTAGAGAGTTTGGTTGAGAGAAAAGAGTGGTTTGGTTGTGGGAGCAGGGTTATAATAACTACAAGAGACATGCAGTTACTAACATCATATGGAATGGATGAAAGTACTTATAAAATTGATTTTTTAAATTCAGAAGAGTCCATTCAACTCTTCTCTCAGAAAGCCAATAAATGTGATCAACCACAAGAGCCTCATTTAGAATTGTCAAAATTTTTTGTGCAATATGCTGGAGGTCTTCCTCTGGCTCTTGAGAGGTTGGGTTCTTTTCTTTGTGGAAGGGAAGAATCTCAATGGAAAGAAGTTTTGGATAAGATAAAGGAATGTCCAGAGAATGATATTATAATGGAAAAACTTAGAATAAGTTATGATGGGTTACCAGAACGTTATAAGGCTTTATTTCTTGATATCGCATGTTTCTTTACTGGGTGGGTAAAAGAACATGTGACACAAATTCTAACAATTTGTGAACGTTATCCACCAGATGGAATTAAAGTTCTAATTGATAAATCATTAGCAACTTATGATGGGTTTCATTTGGGGATGCATGATCTACATCAAGAAATGGGAAGAAAAATTGTTATTGAAGAATGTACTACAGATGCTGGCAAACGTAGTAGATTGTGGTCTCTGGAGGACATTGATCTAGTGTTGAAAAATAATAAAGCAACTGATTTGATTCAGGGTATAGTTTTGAAGTCATCCACTCAACCATACAAAGCAATTTGGGATCCTGAAGCCTTCTTAAAGATGAATAATCTTAAACTCCTTATAATTAATTTTCATAATATGCATCTTCCTCTTAGCCTCAAATGTCTTTGTAGTTCACTAAAAGTACTTCAATGGATGGGGTATCCTTTGGGAGCTCTGCCACTTGGTGTACAACTGGATGAAGTTGTATACTTGAAAATGTGTCACAGCAAAATCAAAAAGATTTGGAAAGGAAATCAGACTTTGACAAAGTTGAAGTTCATTGATCTAAGCCATTCCAAAGATCTAATTCAAACCCCTATAGTTTCTGGGGTTCCATGTCTGGAAAGTTTACTTCTTGAAGGTTGTATAAACCTTGTTAAGGTTCATCGATCTGTTGCAAAACACAAGAAGCTTGTTGTATTGAACTTGAAAGATTGCATAAATCTTCAAGTCCTTCCAAGAAAATTGGAAATGGATTCTTTGGAGGAGTTTATTCTTTCTGGCTGCTCAAAAGTTAAAAAGCTCCCTAAGTTTGGGAAGAATATGAAAAGTTTATCGTGGCTTAATTTGGAGGATTGCAAAAACCTTCTATATCTGCCAAATTTTATTTGCAATCTGAAATCTCTTAGAATGCTCAATATTTATGGCTGCTCAAAAATTTCTAAACTACCCAACAATATGAATGAAAATGAGTCTTTGGAGGAACTTCATATGAATGGGAGTGCCATAAGAGAAATCACTTTATCCAAAGTTTGTTTAGGAAATCTTAAAGATCTCTCCTTTGGTGGAAGAATAGAACTAGCATCCAACTCATGCAACTTACTTCAATGGATCTTGAAGTTCAAGAAGCAACCAATTCCAATAATGGAGTTGATCTTGCCTCCTCTTTCACATTTATCCAGCTTGAAGTTCTTGGATTTAAGTTACTGTGACCTTAAGGATGAATCAATTCCGGGTGATCTTGGTTCCTTATCATTTTTGCAAGGTTTAGATCTAAGTGGGAACAATTTTGTTAATCCACCTACACATTGCATTAGTAATCTTTCTATGCTGCAGAGTTTGACCATAACTGATTGTCCAATGCTTGAGTCATTGCCTATTCTTCCACCAAATGTACAATGCTTATTTGCAACTAATTGCACCCAATTGAAACCCTTAAATTTGGACGCACAAATGCTATGGAACATCTTTGAGTCACATATGAATCATCAGATGGAAGATAAGCCACATCTTTGGTTCATCATTCCTGGCAGAGAAATTCCACCATGGTTTGACAATCAAAAATATGATTTGATTAATCCCTTACATCATCCATATAACAAGTTAGGTTGTGATTCATTTGCATCAATAAAAGTGGAAGTACCTAATCATTGTGGTTCAAGTAAATGGTGGGGCATTGCAATATGTCTAGTATTAGAACCTTCAACAATAAAGCAATCCCCATCACATGTGAGGCTAACTTCCATGGTTAACAAGGAAACATGTACTTATTATTGGACATGTAAAGATCCTGATCGAGAACCTGACTTGGCTTTCCCCATTGGACCTTTATTTGGCCACTTAGTTTATGAATGTGGTGACCCTTACATTCATATAATATTCTTGAGAGGTGATCATACATATATTCAACATTATCTAAGAGGAGAGAAAGGCCAAATTCAACTGATATTTTATGTGGAAAATTTTTCTAAGCCAGGGAAGCCAACAATAAAACAATGTGGGTGCCGAGTGATATCTAAGGAAGATGTTGAAAATTGGCGAAAGGACTCAAGTGGTCTTACCATATCAAAACTTGTAGAAATAAATGATAATAAGCGAAGTGGTGATGAAATAGAAGTGGAAGAGCCTACAACATCTACATCACAAAATTAG 3477 0.363 MEKNVSSRWTYHVFLSFTRNEGSHLEFTRHLIASLERKGITTFPYDRDHHYVTLQELHKAIEESLAVIVVLSENYASSTLCLDELEKIILESERVAGREVFPVFYNVTPADVRYQISGFGEAFSKHAASSEEDKRKVQKWRESLQQVTGISGWAWESKNRHKEELIEDIITSVWTKIHPKIPINNDGLVGIDYKVRKMQSLLRIELKDVRFIGIWGMGGIGKTTLARVVFNKIRNKFDVSCFLHNVRKICDETDGMLRLQRTLISHLKLEGLEIEDLGEGKSKIQEVLFNKRVLLVIDDVDDVRHLESLVERKEWFGCGSRVIITTRDMQLLTSYGMDESTYKIDFLNSEESIQLFSQKANKCDQPQEPHLELSKFFVQYAGGLPLALERLGSFLCGREESQWKEVLDKIKECPENDIIMEKLRISYDGLPERYKALFLDIACFFTGWVKEHVTQILTICERYPPDGIKVLIDKSLATYDGFHLGMHDLHQEMGRKIVIEECTTDAGKRSRLWSLEDIDLVLKNNKATDLIQGIVLKSSTQPYKAIWDPEAFLKMNNLKLLIINFHNMHLPLSLKCLCSSLKVLQWMGYPLGALPLGVQLDEVVYLKMCHSKIKKIWKGNQTLTKLKFIDLSHSKDLIQTPIVSGVPCLESLLLEGCINLVKVHRSVAKHKKLVVLNLKDCINLQVLPRKLEMDSLEEFILSGCSKVKKLPKFGKNMKSLSWLNLEDCKNLLYLPNFICNLKSLRMLNIYGCSKISKLPNNMNENESLEELHMNGSAIREITLSKVCLGNLKDLSFGGRIELASNSCNLLQWILKFKKQPIPIMELILPPLSHLSSLKFLDLSYCDLKDESIPGDLGSLSFLQGLDLSGNNFVNPPTHCISNLSMLQSLTITDCPMLESLPILPPNVQCLFATNCTQLKPLNLDAQMLWNIFESHMNHQMEDKPHLWFIIPGREIPPWFDNQKYDLINPLHHPYNKLGCDSFASIKVEVPNHCGSSKWWGIAICLVLEPSTIKQSPSHVRLTSMVNKETCTYYWTCKDPDREPDLAFPIGPLFGHLVYECGDPYIHIIFLRGDHTYIQHYLRGEKGQIQLIFYVENFSKPGKPTIKQCGCRVISKEDVENWRKDSSGLTISKLVEINDNKRSGDEIEVEEPTTSTSQN. 1159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00683 1158 Pfam NB-ARC domain 194 413 IPR002182 GO:0043531
Seca7g00683 1158 Pfam TIR domain 11 189 IPR000157 GO:0007165
Seca7g00683 1158 SMART till_3 10 150 IPR000157 GO:0007165
Seca7g00683 1158 Gene3D Ribonuclease Inhibitor 822 942 IPR032675 -
Seca7g00683 1158 ProSiteProfiles TIR domain profile. 9 177 IPR000157 GO:0007165
Seca7g00683 1158 Gene3D - 4 176 IPR035897 -
Seca7g00683 1158 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 712 IPR044974 GO:0006952
Seca7g00683 1158 Gene3D - 346 431 IPR042197 -
Seca7g00683 1158 Gene3D Ribonuclease Inhibitor 693 767 IPR032675 -
Seca7g00683 1158 Gene3D Ribonuclease Inhibitor 510 692 IPR032675 -
Seca7g00683 1158 SUPERFAMILY L domain-like 486 931 - -
Seca7g00683 1158 Gene3D - 177 345 IPR027417 -
Seca7g00683 1158 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 441 IPR027417 -
Seca7g00683 1158 PRINTS Disease resistance protein signature 287 301 - -
Seca7g00683 1158 PRINTS Disease resistance protein signature 211 226 - -
Seca7g00683 1158 PRINTS Disease resistance protein signature 621 637 - -
Seca7g00683 1158 PRINTS Disease resistance protein signature 381 395 - -
Seca7g00683 1158 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 153 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00683 Seca-Chr7 7686968 7694081 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00683 6 796 WRKY Transcription Factor Family AT4G12020 31.122 1.20e-90 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00683 - - gmx:100799850 1405.96