Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07818 ATGTCGATGGTGCTAAGGAAAGTGTGGGAAATGGTGTCGGGTTGCAACAACCCATCAGGAGAAGTGGTGCGTGCGGATTTGGGTGCGTTGGAGCAACTACCCTCTGACATATTGATGCAAATTCTGAAGCTTTTGGGTCCCAAAGAAGCTGCGAAATTGAGCTTGGTTTGCAAGGCTTTGAGATTTCAGGTTTCGGATAATCGCCTTTGGCTTCACTTCCTTCAGACCCACCAGGCTGAACCCTCTTGGGATTCTGTTTTCTTTGCTGAGACCACCTTGACTTCTGGCTACCCTCTTCCATCCTTCGTCGGTCAGAGGCTCCAGCTGTCATTCAAGCATATTTATGGCCAGAGAGCACAAGTTCCTGGTGCTATTATTATTGATGGCGGCTCTGGCTATTGCAAATTTGGCTGGAGCAAGTATTCTTGTCCATCAGGGCGATCAGCAACATTTTTGGAATTTGGTAACATTGAGTCACCAATGTATACTAGGCTTCGACATTTTTTTGCAACTATTTATAACAGGATGCAGGTGAAACCAAATAAACAACCGGTTATTGTTTCTATACCAATATGCCATTATGATGGTCAGTTACATTTTATGATTTACTTCAGTGGCGCTAATAGAAAAAGAAAAAGGAGTACATTGAGAACTCCAATCATAATTGTTAGAATAAAGTACAGTTTGGCTTAG 693 0.43 MSMVLRKVWEMVSGCNNPSGEVVRADLGALEQLPSDILMQILKLLGPKEAAKLSLVCKALRFQVSDNRLWLHFLQTHQAEPSWDSVFFAETTLTSGYPLPSFVGQRLQLSFKHIYGQRAQVPGAIIIDGGSGYCKFGWSKYSCPSGRSATFLEFGNIESPMYTRLRHFFATIYNRMQVKPNKQPVIVSIPICHYDGQLHFMIYFSGANRKRKRSTLRTPIIIVRIKYSLA. 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07818 230 Gene3D - 122 216 - -
Seca4g07818 230 Pfam F-box domain 31 71 IPR001810 GO:0005515
Seca4g07818 230 SUPERFAMILY F-box domain 28 86 IPR036047 GO:0005515
Seca4g07818 230 CDD F-box_AtARP8-like 29 73 - -
Seca4g07818 230 ProSiteProfiles F-box domain profile. 27 73 IPR001810 GO:0005515
Seca4g07818 230 SUPERFAMILY Actin-like ATPase domain 123 195 IPR043129 -
Seca4g07818 230 SMART fbox_2 33 73 IPR001810 GO:0005515
Seca4g07818 230 Gene3D - 23 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07818 Seca-Chr4 180312493 180314479 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g07818 K16616 - gmx:100791973 320.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g07818 4 180312493 180314479 Seca4g07818 4 180312493 180314479 ECH