Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00166 ATGCTAACCAACACACCCCCACCCTCAGAGCCAATTAATCCATCCACTCTTGAACAAAATGGCATATCAAAACAATCCAGGAATCAAAATTCCAATACCAACAAATCAAGCAAGCTACCAGCAACAGCACTTGGGCAACCTCGATTTCAAAGGACCAAACCAATTATATGGTGTGCTGCTATATTGTGCTTCATATTCAGCCTTGTGCTTATCTTCTTTGGAATTGCAACATTGATTTTCTACCTTACCATGAAACCAAGTAACCCCATATTTGACATTCCCAATGCAAGCCTCAATGTGGTATATTTCGACTCAACACAGTACCTCAATGGTGAATTCACTCTCCTTACAAATTTTTCTAACCCCGACAAAAGAAGTGATGTGAGGTTTGAGTCCTTGGATATTGAGCTTTTCTTCTCAGACAGGCTCATATCATCACAGCCACTCAAGCCTTTCACTCAGAGGCCAGGGGAAACCAGGTTGCAATCAGTGAAGTTCATATCCAGCTTGGTGTTTTTGCCTCAAGATGTTGGTGTGAAACTTCAAAGGCAGGTACAAAGCAACAGGGTCAGCTACAATGCAAGGGGAACATTTAAGGTGAGGGTCAACATGGGTCTTGTCCATTTATCTTACTGGCTACATAGCACATGCCAGCTAGAGATGACAGGTCCTCCAACAGGTGTTCTAGTAGCTAGACAATGCATAACAAAGCGATGA 717 0.4268 MLTNTPPPSEPINPSTLEQNGISKQSRNQNSNTNKSSKLPATALGQPRFQRTKPIIWCAAILCFIFSLVLIFFGIATLIFYLTMKPSNPIFDIPNASLNVVYFDSTQYLNGEFTLLTNFSNPDKRSDVRFESLDIELFFSDRLISSQPLKPFTQRPGETRLQSVKFISSLVFLPQDVGVKLQRQVQSNRVSYNARGTFKVRVNMGLVHLSYWLHSTCQLEMTGPPTGVLVARQCITKR* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00166 238 Pfam Late embryogenesis abundant protein 120 200 IPR004864 -
Rops9g00166 238 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 15 229 - -
Rops9g00166 238 MobiDBLite consensus disorder prediction 14 40 - -
Rops9g00166 238 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00166 Rops-Chr9 2148214 2149234 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00166 - - pvu:PHAVU_008G282100g 344.739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g00166 9 2148214 2149234 Rops9g00166 9 2148214 2149234 ECH
Rops11g02525 11 43006155 43006889 Rops9g00166 9 2148214 2149234 PCT