Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0443 ATGGCGTCGCAAATGGCGATCCTCTTTCGCACGCGCTCCCTCCTCTTCCCAAAACCCTCTTCCCTCATCAAAACCATATCCACATTCCCCTTCCTCTCGCAGGAGCCTCAGCTGGTGGATCCCACCCCTCTCCCGCCCAACCCCGCCTCCGGCAGCCCTCTCTACCACCAAAACTGGCGCACCCCTGGCCCCTCCTCCCATCCATCCGCCCACGCGCTCGCTCCCGTCGGATTCTACAACCGCGCCTCCTCCGACTCCTCTGACCCTCAGGCGCTACTCGACCTCTTCGGCGATTGCATGGCCTCGCACCAGTGGACAGAAGTCAAGAACCTCTTCGAGACCTGGGTCCGCGCCCTCGACAAGACTGGCAAGCCTAACCGCCCTGACGTCAACCTCTTCAACCACTACCTCCGCGCCAACCTCATGCTCGGTGCTTCCCCCTCCGACCTCCTCGACCTCGTCTCTCAGATGGACGAGTTCAACGTGAAGCCCAATACGGCGTCATTTAACCTCGTCCTCAAAGCCATGTGCCAGGCCAACGAAACCGTCGCCGCGGAAAAATTGCTCCAACGGATGTTGCAGACAGGAAATGACTCTCTCCCTGATGACGAATCATACGACTTAGTCATTGGAATGCTCTTTTCCACAGACCATATTGATGCTGCATTCAAATATATAGATCTAATTTTGAAATCTGGTAACGTCTTGTCAATGAAAGTATTTATGAGCTGTGTAAAGAAATGTCTCAGTAAGGGAAGGCTTGATACACTGGTGACAATAATTGAAAGGTGCAGGGCATCAGATAAGAACAAAGCTCTTTGCCCCAACTGGGACTTGTGCAATCTTATTGTTGAAACTGCAACTGGAGAGGATAATAGCAAACTAGCTTTTTTTGGCCTGGAGTATATGGCCAGATGGATTGTAAAGGGTGAACGTCAAAGACCCCCTATATTCCTGTCTGTAGATGAAGGTTTAGTTCTGTCAGCAATTTTGACTGCTGGTAGATCCTATAATTCTGAGTTGCTAGGAATATCATGGGCTGTTTTGGACCGCTCACTGAGTAAAAAGAAAGCCCCTAATCCTGAGTCATATCTTGGGAAGATATATGCCCTTGCATCATTGGGAAATCTACAAAAGGCTTTTAGTACTCTGAATGAGTATGAGTTGGCTTATGGAGACGCAGGTCAAGAAGCTGAAGAATTGTTCTGCCCATTTACTTCGTTACATCCATTGGTTGTGGCATGCTCCAAGAAGGGTTTTGAGACTCTAGATAATGTTTATTTTCAACTGGAGAGTTTAAACCATGCAGAGCGTCCTTATAAATCTGTTGCTGCACTAAACTGCGTCATTTTAGGATGTGCAAACATATGGGACCTCGATCGAGCTTATCAAACTTTTGAGTCAATTGGATCTACTTTTGGGTTGAGCCCTAATATTCATTCGTACAACGGGCTGATGTATGCCTTTGGGAAGCTCAAGAAGACACATGAAGCTTCGAAAGTGTTTGAGCACCTGGTGAGTCTGGGTCTCAAGCCTAACGCAAAATCATATTCTCTGCTAGTTGAAGCCCACCTGATTAACCGGGATGTTAAATCTGCTCTTGCAGTGGTTGATGATATGATAACTGCTGGATTTGAACCGTCAAAAGAGATTCTGAAAATGGTCAGGCGGCGATGCGTGAGAGAATTGGACTACGAAAGTGATGAACGAGTACAAAAAGTGGCGAATTCCTTGAAATATATATTGGGTACAGAAGCCCGGCGGGATATTCTGTTTAATCTTGACTACAGTGCGGGTTATGCTTGA 1806 0.4779 MASQMAILFRTRSLLFPKPSSLIKTISTFPFLSQEPQLVDPTPLPPNPASGSPLYHQNWRTPGPSSHPSAHALAPVGFYNRASSDSSDPQALLDLFGDCMASHQWTEVKNLFETWVRALDKTGKPNRPDVNLFNHYLRANLMLGASPSDLLDLVSQMDEFNVKPNTASFNLVLKAMCQANETVAAEKLLQRMLQTGNDSLPDDESYDLVIGMLFSTDHIDAAFKYIDLILKSGNVLSMKVFMSCVKKCLSKGRLDTLVTIIERCRASDKNKALCPNWDLCNLIVETATGEDNSKLAFFGLEYMARWIVKGERQRPPIFLSVDEGLVLSAILTAGRSYNSELLGISWAVLDRSLSKKKAPNPESYLGKIYALASLGNLQKAFSTLNEYELAYGDAGQEAEELFCPFTSLHPLVVACSKKGFETLDNVYFQLESLNHAERPYKSVAALNCVILGCANIWDLDRAYQTFESIGSTFGLSPNIHSYNGLMYAFGKLKKTHEASKVFEHLVSLGLKPNAKSYSLLVEAHLINRDVKSALAVVDDMITAGFEPSKEILKMVRRRCVRELDYESDERVQKVANSLKYILGTEARRDILFNLDYSAGYA* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0443 601 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 513 547 IPR002885 -
Pvu3g0443 601 PANTHER OS07G0599000 PROTEIN 1 601 IPR044605 -
Pvu3g0443 601 Pfam Pentatricopeptide repeat domain 127 176 IPR002885 -
Pvu3g0443 601 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 165 199 IPR002885 -
Pvu3g0443 601 Gene3D Tetratricopeptide repeat domain 324 586 IPR011990 GO:0005515
Pvu3g0443 601 Gene3D Tetratricopeptide repeat domain 92 305 IPR011990 GO:0005515
Pvu3g0443 601 Pfam PPR repeat family 477 523 IPR002885 -
Pvu3g0443 601 TIGRFAM PPR: pentatricopeptide repeat domain 480 514 IPR002885 -
Pvu3g0443 601 TIGRFAM PPR: pentatricopeptide repeat domain 516 548 IPR002885 -
Pvu3g0443 601 TIGRFAM PPR: pentatricopeptide repeat domain 168 196 IPR002885 -
Pvu3g0443 601 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 478 512 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0443 458 559 Glycosyltransferase AT1G05670 28.846 1.30e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0443 - - gmx:100800731 1008.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0443 3 4803157 4809102 Pvu3g0443 3 4803157 4809102 ECH