Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00522 ATGACATTCCTTCTTCAGACTGTTTCACCTTTACATGGACACTTGGATTATTCATTTGCATCTGCATGGAATCCTGATGGCCGCATATTCGCTACTGGAAATCAAGACAAGACGTGTCGTATTTGGGATGTTAGGAACTTGTCAAAATCTGTTGCTGTACTCAAGGGTAACATTGGAGCTATTCGTTCTATTCGTTTTACATCTGATGGACGTTTCATGGCCATGGCTGAGCCAGCTGACTTCGTACATGTCTATGATGCAAAGAATGGATTTGAGAAGGAGCAAGAGATAGATTTTTTCGGTGAGATATCTGGTGTATCTTTTAGCCCTGATACTGAATCCCTTTTCATTGGAATCTGGGATCGCACTTATGGTAGCCTCCTTCAGTACAACCGCTGCAGGAACTACATGTATCTTGACCGTTTGTAA 429 0.4219 MTFLLQTVSPLHGHLDYSFASAWNPDGRIFATGNQDKTCRIWDVRNLSKSVAVLKGNIGAIRSIRFTSDGRFMAMAEPADFVHVYDAKNGFEKEQEIDFFGEISGVSFSPDTESLFIGIWDRTYGSLLQYNRCRNYMYLDRL* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00522 142 PANTHER WD REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_8G05640)-RELATED 6 140 - -
Pte2g00522 142 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 11 46 - -
Pte2g00522 142 Pfam WD domain, G-beta repeat 7 43 IPR001680 GO:0005515
Pte2g00522 142 Gene3D - 4 138 IPR015943 GO:0005515
Pte2g00522 142 SUPERFAMILY TolB, C-terminal domain 10 131 - -
Pte2g00522 142 Pfam Uncharacterised protein domain (DUF2415) 59 95 IPR019417 -
Pte2g00522 142 ProSiteProfiles Trp-Asp (WD) repeats profile. 11 52 IPR001680 GO:0005515
Pte2g00522 142 SMART WD40_4 4 43 IPR001680 GO:0005515
Pte2g00522 142 SMART WD40_4 90 131 IPR001680 GO:0005515
Pte2g00522 142 SMART WD40_4 47 86 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00522 Pte-Chr2 3992807 3993235 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00522 6 123 Miscellaneous Gene Families AT5G08390 28.814 2.36e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00522 - - qsa:O6P43_031415 267.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g00522 2 3992807 3993235 Pte2g00522 2 3992807 3993235 RCT