Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3837 ATGAAAAGACCACGAAAATCAAAGAAAAGGGTTTGCATGAAACAATCGGTTGCTGAGTGTTATCAACAAGAAGAAAAAGAAGAAGACGAAAGAGAGTTTCCAAAATGGATCACACATTATTGTAGTGATCATCAAATACTTTTGGTTGGTGATGGCGATTTCTCATTCTCCCTTTCCCTCGCTAAAGCTTTCGGCTCTGCTTCAAACATTGTTGCTTCTTCTCTCGACTCATACGCCGAGGTTACCAAGAAGTACAAGAATGCAAAGTCAAATTTAGAAGAATTGCAGAAGCTGGGAGCATACTTGTTACATGGAGTTGATGCTACAAAAATGAAACTTCATCCAGACTTAAAAATACGGAGGTTTGATCGCATTATATTCAACTTTCCTCATGCAGGCTTTCACGGGAAGGAAGACAACTTGATGATGATCAAGATGCATATGGATCTTGTGTTTGGTTTCTTCAAGAATGCAAGTCACATGCTTAGGATCAATGGTGAAGTTCATGTCAATCACAAAACTACTCCCCCTTTTGATACCTGGAACATACAGAAGCTCGCCGAGCAAAGCTTTCTGATGATGATCGAGTGTGCTGATTTCAAGCAAGAAGCTTATCCAGGTTATAACAATAAGAGAGGTCATAGATCTCGATGCGATGACCCATTTCCTCTCGGTAAACGACAGCAAGAGATTCAGAACATGGAGCGATTTCCAGCTTCAGTTGATCTCAATTATCATCCTCGAACAAGACTTCCATTTGAAGTGATTCACAACATGGAGCGAATTCCAGCTCCAGTTGATCTCAATTATCATCCTGGAGCAAGTCTCTTTCAAAAACCGAATCAACTCGACTATTACCCACACACTAGTCGCTTTCCGAAAACAGATCGACTCCGTCATTATCCTCAGACAAGTGTCTTTCCAAAAGTGAATCAACTCAATCATTATCCTCAAAGAGTTGCTTCTTCTGCTGACTATTATCATCATTATGCTCGCGAAATGACACAGGACAGTCAAAGATTGCTACGACCAATGGAGTCAAGTTACAACCAATCTTCGCAACAGTGGCCGACACCAACGAATTGTAGACTTTGTTTGACAGAACAGCATAGAAGAATGGATGTTACTCCTTTCATGCCACATGGTGCTAGAAATTATGACTACCACCATTATCAAGTCTATGAAAGAAGCTCAACATATTCGCAAGAAAAACTTTATGGAAATGGTCAGAGGACAAGTGATTGTTATGATATAGCAAGGAATTCGCAAGAAAAACTTTATGGAAATGGTCAGAGGACAAGTGATTGTTATGATATAGCAAGGCATGAGTTGGAGAGGTACAATGCTGAAGTGCCTAGGAGAGAATTTTGTAGTGAAATCTATGTTATCCAATGA 1395 0.4 MKRPRKSKKRVCMKQSVAECYQQEEKEEDEREFPKWITHYCSDHQILLVGDGDFSFSLSLAKAFGSASNIVASSLDSYAEVTKKYKNAKSNLEELQKLGAYLLHGVDATKMKLHPDLKIRRFDRIIFNFPHAGFHGKEDNLMMIKMHMDLVFGFFKNASHMLRINGEVHVNHKTTPPFDTWNIQKLAEQSFLMMIECADFKQEAYPGYNNKRGHRSRCDDPFPLGKRQQEIQNMERFPASVDLNYHPRTRLPFEVIHNMERIPAPVDLNYHPGASLFQKPNQLDYYPHTSRFPKTDRLRHYPQTSVFPKVNQLNHYPQRVASSADYYHHYAREMTQDSQRLLRPMESSYNQSSQQWPTPTNCRLCLTEQHRRMDVTPFMPHGARNYDYHHYQVYERSSTYSQEKLYGNGQRTSDCYDIARNSQEKLYGNGQRTSDCYDIARHELERYNAEVPRREFCSEIYVIQ* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3837 464 Pfam rRNA (uridine-N3-)-methyltransferase BTM5-like 47 212 IPR019446 GO:0070042|GO:0070475
Psa5g3837 464 Coils Coil 78 98 - -
Psa5g3837 464 PANTHER BNAC06G26310D PROTEIN 29 226 - -
Psa5g3837 464 PANTHER PHENYLALANYL-TRNA SYNTHETASE 29 226 - -
Psa5g3837 464 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 56 174 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3837 Psa-Chr5 301928957 301931496 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3837 - - mtr:MTR_3g061070 524.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g3837 5 301928957 301931496 Psa5g3837 5 301928957 301931496 ECH