Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1865g0001 ATGGGAGAACTTGCTTCCTTTGTTTTTGTTCTCTTACTTCATTGCTTCATGGCCTCCTTAGCTTGGAGTAGTGAGACAAATATCACCACCGACACATCAGCACTTCTTGCTTTTAAATCCATTATCACTTCAGATCCATATGATTTCTTAGCTAATTGGTCTGTCTCCTCTTCTCCATGCAATTGGGTTGGTGTCACTTGCAATACTCGCCATGGAAGGATTCATTCTTTAAATCTTGGAGATATGGGTCTTACAGGCATGATATCTCCAAAATTAGGAAATCTCTCATTCCTTGTTGAACTTAATCTTGGTGACAACAACTTTCATGGTGAAATGCCAAAAGAGTTAGTTCAATTGCGAAGATTGAAACAACTCAACCTGAGCTTTAATGAATTCCATGGAGAGGTTCCAGCATGGATAGGGGAGTTGTCAACACTACAACACTTGAGCCTTCGCAATAATAGTTTTAGTGGATTCATTCCAATGTCTATATTCAACTTGTCAAGGTTGGAGATCTTAAATTGGAATTTTAATTTAATTGAAGGCACCATTCCACCTGAGGTGGGAAGACTTGAGAACTTAGAGATTTTACGTCTTGCTGGTAACAAACTTTCAGGGACCATTCCACTTGAGGTGGGAAGACTTAGAAGCTTGAAGGCCTTATATCTTGAAGGCAATAGACTTTCAGGAATCATTCCTCAAACAATTTTCAACTTATCTTCACTTGAATTGTTAAATTTGTCGAAGAATTATTTGTCAGGAGGCATTCCCAATGAAATTGGCAATCTTCCACAGCTACAAATGATATATCTTTCAAACAATCAGCTTTCTGGTTCCATACCATTCTCATTATTTAATAGTTCAATGCTTCAAGTCATTGAGCTTAATTATAATAATCTCTCTGGGAGTCTCCCAACAAAAATGTGTTTTGGGCTTCCGAAACTTGAAAAATTTCAGGTGTTTGCAAATGATTTATCCGGTGAAATACCTTCCGTTTGGCACCAATGCAAGGAATTGATAGATTTGTCATTATCAAATAATGGATTCAACAAAGGATATATACCAAATGATATTGGAAATTTGACCAACCTCCAATTCCTATATCTTGACAACAACAATTTGGAAGGTGAAATTCCATCATCTCTCTTCAATATCCATTCTTTAAGAGAAGTAAGTTTATGGGGAAACAATTTAGCTGGTACTCTTCCAATATCAATTGCCAATTGGACGTTGCTGGAATACTTATATTTAAGTCATAATTCCTTCACAGGTGAAATTCCAAAACTTCTATTTAACATGCCTTCTTTGACAATTGTTGACCTTTCCAAGAACAATTTATATGGTAATATGCCAGAAGAGATGTGCCGTCAATTCTCTTTTCTTAAAATCTTCTCAGTTGCTGAGAATCAATTAGAGGGAAAAATTCCAAAATCAATAAGTAATTGCACATCTTTAAAATGGTTTGAACTTTCCCACAATCATTTTCATGGTAATCTACCAGAAGAGATGTGCCAAAGACTCCCATTACTTGAAGCCATCCAGATCGTTGATAATAAATTAGAAGGAAGCATTCCAGAATCATTAAGTAACTGCACATCTTTAACAAGATTATTTTTGGATGTCAACTCATTTACAGGTTTTATACCCAAGGGCATAGGAAATCTTGCTAAACTTCAAGAGTTAGCTTTGGCAGATAATTATTTGCATGGGCCTATACCTTCCACCATATTCAACATCTCATCATTGATACATGTGTACCTTGGAACTAACTTCCTCTCTGGCCTTTTGCCATCATATCTAGGAAGTGGCCTTCCCAACCTAAACTTATTGAGTTTGGAGGGAAATGAACTTACTGGACAAATTCCCAACAGTATCTCAAATGCTTCTAAGCTCACTGAGTTAGTTTTAGCATCAAATAAATTTAGTGGAGCTATACCCAATTTACTTGGGAATTTAACCAATTTGATGACAATGGAATTTGGTTGGAATAACTTCAATGGGTTGATTCCTACTGCAATCAACAAACTACAAAGCCTTCAATATTTAAGTCTCTATTACAATAGAATGCAAGGGTCTATCATTGATGAAATTTGTCAACTCAAAAGTTTAAGTGAGTTGGATCTAGCTGGCAACATGTTTACAGGAATGATCCCCGCATGTCTTGGGAATCTATCTTCTTTGAGAAAGTTGGATTTCAGCTCTAACAAATTGATTTCTCATATTCCCTCCTCATTTTGGAGTCTTGAAGATATCATGGAATTAGATTTGTCCTCCAATACATTGAGTGGAACAATTCCACTTGAGATTTCAAACATGAGGGCACTTACACTCTTGAATTTATCAAGAAATCAAATTTCAGGAAACATCCCTGAATCTATGGGTGGCTTGAAGACTTTGTTGAACCTATCTTTGGCTCACAACAAATTCCAGGGGCCTATTCCTAAATCACTTGGTGGCATGATAAGTATTGAGTTCTTGGATCTTTCTCAAAATTATTTGTCTGGTGTGATTCCAAAGTCCTTAGAGTCTCTTGTCTATATGAAGTACATTAACCTTTCCTACAATTTCTTATATGGAGAAATTCCAAATGGTGGGCCTTTCCAAAATTTTACAGCTGAATCTTTTATGATGAATGAAAATCTTTGTGGAAGGCCCCAACTTCATATCCAACCATGTAGAAAAGAAAACAAGCATAGGTCAAATAAAGTGATGCTTTTGATCATATGCTTGGTGCCTATAATAGTTTTCATTTTGGTTGTTTCATGCATAGTCTTTCTAAAGCATAAGAGAAAACATGCTAATGATTCAACCGATGCGGTTTTAATGAATTTGGAGATACCAATAAGAATATCCTATTATGAAATTCTACAAGGAACAAATAGGTTTGATGAAAGTAATCTACTTGGAAGGGGAAGTTTTGGATCAGTATACAAAGCAACATTGTCAAATGGAAAGACAGTTGCTATTAAAATATTTAACTTTGACTTGGAAGAGGCATGGAAGAGTTTTGATACAGAATGCACTGCCATATGCAATTTACGTCACCGCAATCTCATCAGCATCATAAGCAGCTGCTCTAATGATAATTTTAAATCATTAATCATGGAGTTTATGTCAAATGGAAGTCTTAATAAATGGTTGTACTCTCATAACTATTGCTTGGATATTTTTCAAAGATTGAATATAATGATTGATGTGGCTTCAGCACTAGAATATCTTCATAGTGGTTCCTCTACACCAGTGGTTCATTGTGATGTGAAGCCAAGCAATGTTTTATTGGATGAAAATATGGTGGCACATCTCAGTGATTTTGGTATTGCCAAATTATTAGGTGACACAGAATCAGAAATTTACACCAAGACTTTGGCTACAATTGGCTATATGGCACCAGAGTATGGATCAAAAGGAGCTATTTCTAGTAAAGGAGATGTGTATAGTTATGGCATTTTGCTCATGGAAATGCTGACGAGGAAAAATCCAACAGATGACCTGTTTAATGAAAGTCTAAGTTTGAAGGATTGGGTTAGCAAATCAACTCCTCATTCAATAATCAACATTTTAGATGTCAATTTGCTGCAAGGAGACAATCAAAATATTGGCAAAATATTGTCACATGTGTCATCAATATTTGAGTTGGCCTTGAATTGTTGTGCTGATTTACCGGAGACACGAATTAATATGACAGATGTTGTAGTATTCTTGAAAAAATTTAAGGTCTCATTTTTAAAAAATGTTAGAGCCGCACTGGTTGAGTAA 3756 0.3568 MGELASFVFVLLLHCFMASLAWSSETNITTDTSALLAFKSIITSDPYDFLANWSVSSSPCNWVGVTCNTRHGRIHSLNLGDMGLTGMISPKLGNLSFLVELNLGDNNFHGEMPKELVQLRRLKQLNLSFNEFHGEVPAWIGELSTLQHLSLRNNSFSGFIPMSIFNLSRLEILNWNFNLIEGTIPPEVGRLENLEILRLAGNKLSGTIPLEVGRLRSLKALYLEGNRLSGIIPQTIFNLSSLELLNLSKNYLSGGIPNEIGNLPQLQMIYLSNNQLSGSIPFSLFNSSMLQVIELNYNNLSGSLPTKMCFGLPKLEKFQVFANDLSGEIPSVWHQCKELIDLSLSNNGFNKGYIPNDIGNLTNLQFLYLDNNNLEGEIPSSLFNIHSLREVSLWGNNLAGTLPISIANWTLLEYLYLSHNSFTGEIPKLLFNMPSLTIVDLSKNNLYGNMPEEMCRQFSFLKIFSVAENQLEGKIPKSISNCTSLKWFELSHNHFHGNLPEEMCQRLPLLEAIQIVDNKLEGSIPESLSNCTSLTRLFLDVNSFTGFIPKGIGNLAKLQELALADNYLHGPIPSTIFNISSLIHVYLGTNFLSGLLPSYLGSGLPNLNLLSLEGNELTGQIPNSISNASKLTELVLASNKFSGAIPNLLGNLTNLMTMEFGWNNFNGLIPTAINKLQSLQYLSLYYNRMQGSIIDEICQLKSLSELDLAGNMFTGMIPACLGNLSSLRKLDFSSNKLISHIPSSFWSLEDIMELDLSSNTLSGTIPLEISNMRALTLLNLSRNQISGNIPESMGGLKTLLNLSLAHNKFQGPIPKSLGGMISIEFLDLSQNYLSGVIPKSLESLVYMKYINLSYNFLYGEIPNGGPFQNFTAESFMMNENLCGRPQLHIQPCRKENKHRSNKVMLLIICLVPIIVFILVVSCIVFLKHKRKHANDSTDAVLMNLEIPIRISYYEILQGTNRFDESNLLGRGSFGSVYKATLSNGKTVAIKIFNFDLEEAWKSFDTECTAICNLRHRNLISIISSCSNDNFKSLIMEFMSNGSLNKWLYSHNYCLDIFQRLNIMIDVASALEYLHSGSSTPVVHCDVKPSNVLLDENMVAHLSDFGIAKLLGDTESEIYTKTLATIGYMAPEYGSKGAISSKGDVYSYGILLMEMLTRKNPTDDLFNESLSLKDWVSKSTPHSIINILDVNLLQGDNQNIGKILSHVSSIFELALNCCADLPETRINMTDVVVFLKKFKVSFLKNVRAALVE 1251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1865g0001 1251 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 767 889 - -
Prci1865g0001 1251 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 139 232 - -
Prci1865g0001 1251 ProSiteProfiles Protein kinase domain profile. 962 1242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1865g0001 1251 Gene3D Ribonuclease Inhibitor 186 309 IPR032675 -
Prci1865g0001 1251 SUPERFAMILY L domain-like 630 886 - -
Prci1865g0001 1251 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1081 1093 IPR008271 GO:0004672|GO:0006468
Prci1865g0001 1251 Gene3D Phosphorylase Kinase; domain 1 922 1037 - -
Prci1865g0001 1251 Gene3D Ribonuclease Inhibitor 310 385 IPR032675 -
Prci1865g0001 1251 Gene3D Ribonuclease Inhibitor 386 456 IPR032675 -
Prci1865g0001 1251 PANTHER OS04G0122200 PROTEIN 642 1243 - -
Prci1865g0001 1251 SMART LRR_sd22_2 263 284 - -
Prci1865g0001 1251 SMART LRR_sd22_2 555 581 - -
Prci1865g0001 1251 SMART LRR_sd22_2 676 699 - -
Prci1865g0001 1251 SMART LRR_sd22_2 191 212 - -
Prci1865g0001 1251 SMART LRR_sd22_2 724 740 - -
Prci1865g0001 1251 SMART LRR_sd22_2 361 387 - -
Prci1865g0001 1251 SMART LRR_sd22_2 215 241 - -
Prci1865g0001 1251 Pfam Protein kinase domain 963 1230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1865g0001 1251 ProSitePatterns Protein kinases ATP-binding region signature. 968 990 IPR017441 GO:0005524
Prci1865g0001 1251 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1038 1247 - -
Prci1865g0001 1251 Gene3D Ribonuclease Inhibitor 457 600 IPR032675 -
Prci1865g0001 1251 Gene3D Ribonuclease Inhibitor 601 895 IPR032675 -
Prci1865g0001 1251 SMART serkin_6 962 1238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1865g0001 1251 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Prci1865g0001 1251 FunFam Serine-threonine protein kinase plant-type 943 1037 - -
Prci1865g0001 1251 SUPERFAMILY L domain-like 29 333 - -
Prci1865g0001 1251 SMART LRR_typ_2 95 119 IPR003591 -
Prci1865g0001 1251 SMART LRR_typ_2 143 167 IPR003591 -
Prci1865g0001 1251 SMART LRR_typ_2 555 579 IPR003591 -
Prci1865g0001 1251 SMART LRR_typ_2 724 748 IPR003591 -
Prci1865g0001 1251 SMART LRR_typ_2 433 457 IPR003591 -
Prci1865g0001 1251 SMART LRR_typ_2 772 796 IPR003591 -
Prci1865g0001 1251 SMART LRR_typ_2 700 723 IPR003591 -
Prci1865g0001 1251 SMART LRR_typ_2 263 287 IPR003591 -
Prci1865g0001 1251 SMART LRR_typ_2 820 843 IPR003591 -
Prci1865g0001 1251 SMART LRR_typ_2 604 628 IPR003591 -
Prci1865g0001 1251 SMART LRR_typ_2 361 385 IPR003591 -
Prci1865g0001 1251 SMART LRR_typ_2 215 239 IPR003591 -
Prci1865g0001 1251 SMART LRR_typ_2 191 214 IPR003591 -
Prci1865g0001 1251 FunFam Leucine-rich repeat receptor-like kinase 30 138 - -
Prci1865g0001 1251 SUPERFAMILY RNI-like 342 666 - -
Prci1865g0001 1251 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 251 477 - -
Prci1865g0001 1251 Gene3D Transferase(Phosphotransferase) domain 1 1038 1246 - -
Prci1865g0001 1251 Gene3D Ribonuclease Inhibitor 30 185 IPR032675 -
Prci1865g0001 1251 FunFam Leucine-rich repeat receptor-like protein kinase TDR 479 766 - -
Prci1865g0001 1251 Pfam Leucine rich repeat 387 446 IPR001611 GO:0005515
Prci1865g0001 1251 Pfam Leucine rich repeat 216 276 IPR001611 GO:0005515
Prci1865g0001 1251 Pfam Leucine rich repeat 702 761 IPR001611 GO:0005515
Prci1865g0001 1251 Pfam Leucine rich repeat 630 688 IPR001611 GO:0005515
Prci1865g0001 1251 SUPERFAMILY Protein kinase-like (PK-like) 943 1234 IPR011009 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1865g0001 496 871 Receptor kinase-like Gene Family AT5G46330 36.436 2.77e-55 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci1865g0001 Pkinase 8.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1865g0001 - K13420 gmx:100784397 1172.53