Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0396 ATGTCTTCCTCCAAGCGATCAAGGCTCGCCGGAACTCCGATAACCTCCACTTCCACTCAGCTGCCACCTAACTTCTTCTTCGGCGACCACGAACACTCCGTCATCGTTGAGGCACTCACCAATGTCGTCGTCGGTTCCACCTGCACTATCTCTGCCGCCACCTCCAGCGATCTCATCCAAGAAATTCGATTTCCTCCTGCCTTTGAGTACTCCGATGCCGTATCCACCACCACGTCGCCACCAATCGGAATTGTTCCGACCATGAGCCTCGAGACTTGCGGCGAATGCAAAATCGAAGGGTGCTTAGGGTGCAAATTTTTTCCAGAGGAGAAAAAGAAAAATGGAGGGAAAAAGAAGATGGCGACGACGTCATCGAAAAAGAAGAAGTACAGAGGAGTGCGACAGAGGCCGTGGGGAAAATGGGGCGAGATCCGAGACCCGAGAAGGGCGACCCGGGTTTGGTTGGGGACGTTCAATACCGCGGAGGAAGCGGCACGCGCATACGATAATGCGGCGATTGAATTTCGCGGTCCGCGAGCGAAGCTCAATTTCCCGTTTCCCGATAACTCACAGAGTGATGCGCATTCGCAAACAGAGCATTTAGAAGTGGAACGCTCAGAGTCCGTGCTGGAGCAAGCAGAGGAGGGAAATAGAAACTCAAATCCTGGGGACTACTATGACGATGTTTGGACGATGGGAATTGGTAATAGTAAGGAAAATGAATTCTGGGATGGACTTGGAGACCCTGAATTTCAGCAATGGATGACGACAATGATGATGGATTTACGTGGAGATTCCTCGGACTCTGCTACTGCTAATAGCCAAGTCCTCACAGTTGGTGATTCTTTTCATCCCAGAAAAATCCAAATAAAAAATTGCACAATTTACTTAATTTAA 897 0.4972 MSSSKRSRLAGTPITSTSTQLPPNFFFGDHEHSVIVEALTNVVVGSTCTISAATSSDLIQEIRFPPAFEYSDAVSTTTSPPIGIVPTMSLETCGECKIEGCLGCKFFPEEKKKNGGKKKMATTSSKKKKYRGVRQRPWGKWAXEIRDPRRATRVWLGTFNTAEEAARAYDNAAIEFRGPRAKLNFPFPDNSQSDAHSQTEHLEVERSESVLEQAEEGNRNSNPGDYYDDVWTMGIGNSKENEFWDGLGDPEFQQWMTTMMMDLRGDSSDSATANSQVLTVGDSFHPRKIQIKNCTIYLI 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0396 299 CDD AP2 128 186 IPR001471 GO:0003700|GO:0006355
Prci14g0396 299 ProSiteProfiles AP2/ERF domain profile. 129 186 IPR001471 GO:0003700|GO:0006355
Prci14g0396 299 SMART rav1_2 129 192 IPR001471 GO:0003700|GO:0006355
Prci14g0396 299 FunFam Ethylene-responsive transcription factor 2 128 187 - -
Prci14g0396 299 PRINTS Ethylene responsive element binding protein signature 152 168 IPR001471 GO:0003700|GO:0006355
Prci14g0396 299 PRINTS Ethylene responsive element binding protein signature 130 141 IPR001471 GO:0003700|GO:0006355
Prci14g0396 299 MobiDBLite consensus disorder prediction 196 213 - -
Prci14g0396 299 Pfam AP2 domain 129 178 IPR001471 GO:0003700|GO:0006355
Prci14g0396 299 Gene3D AP2/ERF domain 128 187 IPR036955 GO:0003700|GO:0006355
Prci14g0396 299 SUPERFAMILY DNA-binding domain 129 187 IPR016177 GO:0003677
Prci14g0396 299 MobiDBLite consensus disorder prediction 183 225 - -
Prci14g0396 299 PANTHER DNA-BINDING DOMAIN 112 215 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0396 Prci-Chr14 2989721 2990947 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0396 123 186 AP2-EREBP Transcription Factor Family AT2G33710 75.000 1.04e-29 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci14g0396 AP2 2.6e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0396 - - pcin:129293970 577.015