Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00122 ATGAAGGTTTCATTATCTGTTTCTGTTTATGGCTTCATTCGACGTCACTATATATACCAACAGCACGATAAAAAAGGTGAAAAGGCAGCGCCAGAGAGTGCACCACCGTATCTGTCGCTGCTATATATTTATTTCCCCTTTTCTTTCTTTTTTCTTTCTCTGCCGTTCCTCTTTCTTCTTCCTATAATTCTTTCACTTTACAGGTCTTTGCCTATGGGAACTAAGTCCGCTGTGGATTTAATGGAGTTTTCATCTGAGGTTCACTTTTCTGGAGTTTACATGAATGACATAGAGCAAAGAAACGCTGGCACAGAGCAACCAACTACTTCTGCAACTGACATGAATAAACAACCTTTTGTGATAGGTGTTGCTGGTGGAGCAGCATCTGGTAAGACATCAGTTTGCGATATGATTATTCAGCAGCTTCATGACCAACGAGTTGTACTTGTTAATCAGGATTCATTTTACCATAATTTGACCGAGGAGGAACTTTTAAGAGTACAAGATTACAACTTTGACCATCCTGAAGCTTTTGACACTGAGCATTTGCTACGTGTAATGGACAAGTTGAAGTGTGGCCAAGCAGTAGATATTCCGAAGTATGACTTTAAGGGTTGCAAAAGTGGTGTTTTTCCAGCGAGACGGGTAAACCTGGCGGATGTTATTATTTTGGAAGGTATCCTTGTTTTCCATGATCCACGAGTCCGGGCATTGATGAATATGAAGATATTTGTCGACACAGATGCTGATATTCGTTTGGCGAGAAGAATTAAGCGGGATACTGCTGACAATGCTCGTGATATTGGAGCTGTGCTCGATCAGTATTCTAAATTTGTGAAGCCGGCTTTTGATGACTTTATTCTTCCCACCAAGAAGTATGCTGATATCATTATACCCCGTGGAAGAGATAATCATGTAGCTATTGATTTGATTGTACAGCATATCCGCACGAAGCTTGGGCAGCATGACTTGTGTAAAATATACCCTAACTTATATGTCATTCAGTCTACTTTTCAGATACGGGGTATGCATACCCTGATTCGTGATTCTCAAACAACGAAACATGACTTTATATTTTATTCTGACCGTTTGATTCGTTTGGTTGTAGAGCATGGCCTAGGGCATCTTCCATTTACGGAAAAGCAAGTAATCACTCCAACTGGGTCGGTTTACAGTGGCGTGGATTTCTGTAAGAGGTTGTGTGGTGTCTCCATCATCCGGAGTGGCGAGAGTATGGAAAATGCTTTACGAGCATGCTGCAAAGGCATCAAGATTGGGAAAATTCTTATTCACAGAGAAGGTGACAATGGTCAACAGCTAATATATGAGAAGTTGCCTAAGGATATCTCAGATAGACATGTATTGCTGTTGGATCCTATCTTAGGCACAGGTAATTCGGCTGTTCAAGCAATTTCTCTACTTTTGAAGAAGGGTGTACCAGAGTCCAACATTATATTTCTCAATCTCATATCAGCTCCTCAAGGTGTTCATGAGGTCTGCAAAAGCTTCCCAAGAATAAAGATCGTGACATCTGATATTGACATTGGTTTGAATGAAGATTTCCGTGTCATACCTGGCATGGGTGAGTTTGGGGATCGGTATTTTGGAACAGATGATGATCAGCAGGTGGTGCTCCCTTCACAGTAG 1647 0.4123 MKVSLSVSVYGFIRRHYIYQQHDKKGEKAAPESAPPYLSLLYIYFPFSFFFLSLPFLFLLPIILSLYRSLPMGTKSAVDLMEFSSEVHFSGVYMNDIEQRNAGTEQPTTSATDMNKQPFVIGVAGGAASGKTSVCDMIIQQLHDQRVVLVNQDSFYHNLTEEELLRVQDYNFDHPEAFDTEHLLRVMDKLKCGQAVDIPKYDFKGCKSGVFPARRVNLADVIILEGILVFHDPRVRALMNMKIFVDTDADIRLARRIKRDTADNARDIGAVLDQYSKFVKPAFDDFILPTKKYADIIIPRGRDNHVAIDLIVQHIRTKLGQHDLCKIYPNLYVIQSTFQIRGMHTLIRDSQTTKHDFIFYSDRLIRLVVEHGLGHLPFTEKQVITPTGSVYSGVDFCKRLCGVSIIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPKDISDRHVLLLDPILGTGNSAVQAISLLLKKGVPESNIIFLNLISAPQGVHEVCKSFPRIKIVTSDIDIGLNEDFRVIPGMGEFGDRYFGTDDDQQVVLPSQ 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00122 548 CDD UMPK 120 318 IPR000764 -
Phco3g00122 548 FunFam Uridine kinase 115 321 - -
Phco3g00122 548 PANTHER URIDINE KINASE 115 448 - -
Phco3g00122 548 CDD PRTases_typeI 395 513 IPR000836 -
Phco3g00122 548 PRINTS Uridine kinase signature 148 159 - -
Phco3g00122 548 PRINTS Uridine kinase signature 250 260 - -
Phco3g00122 548 PRINTS Uridine kinase signature 118 135 - -
Phco3g00122 548 PRINTS Uridine kinase signature 264 275 - -
Phco3g00122 548 PRINTS Uridine kinase signature 193 208 - -
Phco3g00122 548 PRINTS Uridine kinase signature 286 299 - -
Phco3g00122 548 Gene3D - 322 537 IPR029057 -
Phco3g00122 548 FunFam Uridine kinase 322 537 - -
Phco3g00122 548 Pfam Uracil phosphoribosyltransferase 336 537 - -
Phco3g00122 548 Pfam Phosphoribulokinase / Uridine kinase family 120 306 IPR006083 GO:0005524|GO:0016301
Phco3g00122 548 Gene3D - 114 321 IPR027417 -
Phco3g00122 548 SUPERFAMILY PRTase-like 321 538 IPR029057 -
Phco3g00122 548 NCBIfam uridine kinase 116 318 IPR000764 -
Phco3g00122 548 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 108 311 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00122 Phco-Chr3 785644 792916 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00122 3 785644 792916 Phco3g00122 3 785644 792916 ECH
Phco11g01825 11 14585240 14591285 Phco3g00122 3 785644 792916 PCT