Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g1737 ATGAGTTTATTCGCATATTTTTCTTCACAACCAGAAAAGAAAGTGTCAAGAAAATCCCACCATGTAAAGAATACAGAGTGGTTTCCATCTACAACTTCTGCTCCATTTAAAGCAGAAACTTATAACTTTTATCGAAAGCTAACCTCACAGCCAACAAAACCTGAAACAAACAACGATGCTACCAATAAAATTGCTTCACAGAATTTCACCTTCCGGGATCTAGCGGTGGCCACAAGGAACTTCAGGCAAGAAACCCTAATTGGTGAAGGTGGATTTGGGAGGGTATATAAAGGGAGAATTGAAAAAACCAACCAGGATGTAGCTGTGAAGCAACTTGACAGGAATGGGTTTCAAGGGAATAGAGAGTTCCTTGTTGAAGTGTTGATGTTGAGCCTCTTACATCATGATAATCTAGTGAATCTAGTTGGATATTGTGCTGATGGAGATCAGAGACTTTTAGTATACGAGTACTTACCATCTGGATCTCTGGAGGATCATCTTCTTGATGTGCCTCCTGATCAAAAGCCACTAGATTGGAATACGAGGATGAATATAGCATTGGGAGTAGCAAAAGGATTAAAATATTTACATGAAAAGATAAATCCACCAGTGATTTTTAGGGACTTGAAACCAGCCAACATCTTGCTAGACAAGGATTTCAATGCCAAACTTTCAGATTTTGGAGTAGTAGCCAAGGCTGGACCTATGGGACACAAATCCCATGTTTCTTCTAGAGTTATGGGAACTTATGGATATTGTGCTCCTGAATATCAACGAACAGGTCAACTCACCGTAAAATCAAATGTTTATAGTTTTGGAGTTGTCTTGCTGGAATTGATCACTGGGAAAAGAGTCATTGACACCACAAGATCCACAGGAGAACAGAACCTTATTACTTGGGCACATACAATATTCAAGAACCCACATAGACATCCAGAACTAACAGATCCTCTTCTGAAAGGAAAATTCCCTTTAAAAGCACTAAACCAAGTAGTGGCTATGGCAGCCATGTGCCTCAAAGAGGAAGCTGCTGACAGGCCATTGATGAGGGATGTAGTGAGTGTCCTTAGCTTCCTTGAAGATTATGATGACGACGACGATGATGATGTTGAATCATCATATGAAAGCCAACATAATTATGATGCTAATAAACAAGCCAGCTCTAATATTTTATGGGATCTAATTTCTGCAAATTGA 1197 0.3943 MSLFAYFSSQPEKKVSRKSHHVKNTEWFPSTTSAPFKAETYNFYRKLTSQPTKPETNNDATNKIASQNFTFRDLAVATRNFRQETLIGEGGFGRVYKGRIEKTNQDVAVKQLDRNGFQGNREFLVEVLMLSLLHHDNLVNLVGYCADGDQRLLVYEYLPSGSLEDHLLDVPPDQKPLDWNTRMNIALGVAKGLKYLHEKINPPVIFRDLKPANILLDKDFNAKLSDFGVVAKAGPMGHKSHVSSRVMGTYGYCAPEYQRTGQLTVKSNVYSFGVVLLELITGKRVIDTTRSTGEQNLITWAHTIFKNPHRHPELTDPLLKGKFPLKALNQVVAMAAMCLKEEAADRPLMRDVVSVLSFLEDYDDDDDDDVESSYESQHNYDANKQASSNILWDLISAN 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g1737 398 ProSiteProfiles Protein kinase domain profile. 81 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g1737 398 Gene3D Transferase(Phosphotransferase) domain 1 158 384 - -
Mibi04g1737 398 SUPERFAMILY Protein kinase-like (PK-like) 67 363 IPR011009 -
Mibi04g1737 398 FunFam Serine/threonine-protein kinase PBS1 158 374 - -
Mibi04g1737 398 ProSitePatterns Protein kinases ATP-binding region signature. 87 110 IPR017441 GO:0005524
Mibi04g1737 398 Pfam Protein kinase domain 82 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g1737 398 CDD STKc_IRAK 87 356 - -
Mibi04g1737 398 Gene3D Phosphorylase Kinase; domain 1 52 157 - -
Mibi04g1737 398 SMART serkin_6 81 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g1737 398 FunFam Serine/threonine-protein kinase PBS1 53 157 - -
Mibi04g1737 398 PANTHER OS07G0668900 PROTEIN 42 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g1737 Mibi-ChrMibi04 45768645 45771530 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g1737 1 396 Glycoside Hydrolase AT3G07070 61.314 9.81e-173 487
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mibi04g1737 Pkinase 1.7e-47 CL0016