Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01098 ATGGCTCAATACCATGGGGATGAAATGGAGTATGTTCAAGATGATAATGAGATGGCTGAGGTAGATGATGATATGTATTTTCGTGGTGGGAGAGCACTTGGCGAATCTGATACTGATGAGGATGATGACGATGAATACGATCCTTTGGAAAACCGAATAACTGATACCACTGCAGCTGAAGCTAGGAGGGGAAAAGATATCCAGGGTATACCTTGGGATAGGCTGAGCATTACTCGTGAGAAATATCGAGAAACAAGACTCGAGCAGTACAAAAATTATGAAAATATAGCACAATCTGGGGAACTGTCAGAGAAGGAATGCAAAGCAACACAAAAAGGGGGATTGTACTACGATTTCTGGCAAAATACAAGATCTGTGAAGTCAACAATACTTCATTTCCAACTGAGAAACTTAGTTTGGTCAACATCAAAACATGATGTATATCTTGTTGCACATTACTCAATTGTTCACTGGTCTTCATTAAGTTCTAAGAGATCTGAAGTTCTCAATGTATCAGGGCATGTTGCTCCATGTGAGAAACATCCTGGAAGCCTCTTGGAGGGTTTTACTCAGACACAAATTAGTACACTGGCTGTACGTGATAACTTGTTGATTGCTGGAGGTTTTCAAGGAGAGCTTATTTGCAAGTACTTAGACCGACCCGGGGTTAGCTTTTGTTCTCGAACTACGTATGAGGACAATGCGATCACAAATGCTGTTGAGATTTATGAGCACCCCAGTGGAGCTGTTCATTTCATGGCTTCAAACAATGATGGTGGAATCAGGGACTTTGATATGGAGACATTTCAGCTTACAAAGCATTCATGCTTTCCTTGGCCAGTAAATCATACTTCATTGAGCCCTAATGGGAAACAACTTGTAATTGTTGGAGACAACCCAGATGGGTTACTGGTGGATGCTCAAACAGGAAAGACTATTGCCCCTCTATGTGGACACTTGGATTATTCATTTGCATCAGCATGGCATCCTGATGGTTTCATTTTTGCCACTGGGAACCAAGATAAAACATGCCGCATTTGGGATGTTCGGAATCTATCAAAGTCTGTTGCTGTTCTTAAGGGGAACCTTGGAGCTATACGCTCAATACGCTTCACAACTGATGGACGGTATATGGCAATGGCTGAGCCAGCTGACTTTGTGCATGTCTATGATGCAAAGCAAGGATTTGAAAAGGAGCAAGAGATCGATTTTTTTGGAGAGGTCTCAGGCGTATCTTTTAGCCCCGACACAGAGTCGCTTTTTATTGGTGTATGGGATCGTACTTATGGAAGTCTTCTTCAGTTCAATCGACACCGAAACTATACGTATCTTGATTACTTGTAA 1344 0.4189 MAQYHGDEMEYVQDDNEMAEVDDDMYFRGGRALGESDTDEDDDDEYDPLENRITDTTAAEARRGKDIQGIPWDRLSITREKYRETRLEQYKNYENIAQSGELSEKECKATQKGGLYYDFWQNTRSVKSTILHFQLRNLVWSTSKHDVYLVAHYSIVHWSSLSSKRSEVLNVSGHVAPCEKHPGSLLEGFTQTQISTLAVRDNLLIAGGFQGELICKYLDRPGVSFCSRTTYEDNAITNAVEIYEHPSGAVHFMASNNDGGIRDFDMETFQLTKHSCFPWPVNHTSLSPNGKQLVIVGDNPDGLLVDAQTGKTIAPLCGHLDYSFASAWHPDGFIFATGNQDKTCRIWDVRNLSKSVAVLKGNLGAIRSIRFTTDGRYMAMAEPADFVHVYDAKQGFEKEQEIDFFGEVSGVSFSPDTESLFIGVWDRTYGSLLQFNRHRNYTYLDYL 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01098 447 PANTHER WD REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_8G05640)-RELATED 7 445 - -
Mepo6g01098 447 MobiDBLite consensus disorder prediction 1 49 - -
Mepo6g01098 447 FunFam WD-40 repeat family protein 229 445 - -
Mepo6g01098 447 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 316 351 - -
Mepo6g01098 447 SUPERFAMILY TolB, C-terminal domain 246 435 - -
Mepo6g01098 447 ProSiteProfiles Trp-Asp (WD) repeats profile. 316 357 IPR001680 GO:0005515
Mepo6g01098 447 SMART WD40_4 309 348 IPR001680 GO:0005515
Mepo6g01098 447 SMART WD40_4 352 391 IPR001680 GO:0005515
Mepo6g01098 447 SMART WD40_4 395 436 IPR001680 GO:0005515
Mepo6g01098 447 Pfam WD domain, G-beta repeat 313 348 IPR001680 GO:0005515
Mepo6g01098 447 Gene3D - 221 446 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01098 Mepo-Chr6 11726911 11735219 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01098 304 428 Miscellaneous Gene Families AT5G08390 28.800 5.52e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01098 - - gmx:100788712 822.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g01098 6 11726911 11735219 Mepo6g01098 6 11726911 11735219 ECH