Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2509 ATGGCTATTGTAAATGAAGATGTTCAACAAGAATTTATTCCACCGAAGAAGAAACCACCTACTGAAGATGAGAAAAGGAAGAAGAAAATTGTTGCTGGGAGTTTGATGAAAGCTTTGATTAGGCCTGGTGGTGGTGATTCTGGACCTTCAGATGGTGATCAGGTTATCTATCACAGTACAATTCGAACTTTGGATGGAGTAGTTATGGAATCTACCCGATCCGAACATGGAGGCAAGGGCATACCGATAAGACATGTATTGGGTAAAAGCAAGATGCTATTGGGCTTGCTAGAAGGAATTCCTACAATGTTGAAGGGTGAAGTGGCAATGTTCAAGATGAAGCCTCAGTTGCATTATGGTGAGGGTGATTGTCCTATTTCTGCTCCTGATGGTTTTCCTAAGGATGATGAACTCCATTTTGAAATTGAGCTGATAGAGTTTTTCAAAGCCAAGGTTGTCACTGAGGATTTGGAAGTAATTAAAAAGGTTGTACATGAAGGGCAGGGTTGGGAATCTCCGCGAGAACCTTATGAAGTGAAGGCTTGGATTTCAGCAAAGACAGTTACTGGGAAATTGATCATGTCACACACAGAAGGAGAACCATACTTCTTTACATTTGGAAAATCAGAGGTACCTAAAGGTCTTGAAATGGGGATCGGAACAATGGTTCGGGAAGAGAAAGCTGTTATATATGTTACAAGTCAGTATTTAACCGAGTCTCCTCTGATGCCTGTTATAGAAGATTCTGAAGTCCAGTTTGAAGTGGAGCTTGTTCACTTTATTCAAGTGAGGGATGTGCTTGGAGATGGCCGTCTGATAAAACGCCGGATTCGTGATGGAAAAGGTGATTTTCCAATGGATTGCCCCCTTCATGACAGTCTACTTCATGTTCATTACAAGGGCACTGTTCTCAATGAAGAAAAGAGGGTGTTCTATGACACAAGAGTTGACAACGATGGTCAACCATTGGATTTCTGTTCTGGAGAAGGGCTTGTACCAGAGGGATTTGAATTGTGTGTTCGTCTGATGCTACCAGGAGAGATGGCTCTTGTCACATGTCCGCCAGACTATGCTTATGATAAGTTTCCAAGGCCTTCAAATGTCCCCGAGGGTGCTCATATTCAATGGGAAATTGAGCTTCTATCTTTTGAAATGCCAAAGGACTGGACAGGAATGGACTTTATAAGTATAATGAACGAAGCTGAAAATATCAGAAACACGGGTAACAGGTTGTTCAAAGAAGGAAAATATGAACTTGCAAAGGCAAAGTATGAAAAGGTGCTTCGAGAATTTAATCATGTTAATCCACAAGACGACGAGGAAGGAAAAGTTTTTTCAGATACACGTAATTTGCTACAACTGAATGTTGCTGCATGCTATCTAAAGTTGGGAGAATGCAGAAAGTCCATTGAGACTTGTAATAAGGTTTTAGAAGCAAATCCTGCGCACGTCAAGGGTCTTTATCGTCGTGGAATGGCCTACATGGGTAATGGAGATTTTGAAGAAGCAAGGGCTGATTTCAAAATGATGATGAAAGTCGATAAATCAACTGAATCAGATGCAACTGCAGCTCTTTTAAAACTGAAGCAGAAAGAGCAGGAAGTTGAGAAAAAAGCTCGGAAACAATTTAAAGGACTATTTGACAAGAAGCCTGGAGAAATTGCAGAAGTTAAAGCTAATGAAGATGAAAATCAAGTCACAAGTGAAATCCAGAAAGATGGTGAGGTACAGGGAGACTCATCAGATGGAACGAATTCGGAGGATTCACATGAAGCTGCACCTGGTGCAGATCAAAGGGGTTGGTTCGCTCACTTTTGGCCCACCGGTAGTAGAATTTTGTCATCTCTTGGGCTTCAAAGATGTACCATACTATAA 1875 0.4128 MAIVNEDVQQEFIPPKKKPPTEDEKRKKKIVAGSLMKALIRPGGGDSGPSDGDQVIYHSTIRTLDGVVMESTRSEHGGKGIPIRHVLGKSKMLLGLLEGIPTMLKGEVAMFKMKPQLHYGEGDCPISAPDGFPKDDELHFEIELIEFFKAKVVTEDLEVIKKVVHEGQGWESPREPYEVKAWISAKTVTGKLIMSHTEGEPYFFTFGKSEVPKGLEMGIGTMVREEKAVIYVTSQYLTESPLMPVIEDSEVQFEVELVHFIQVRDVLGDGRLIKRRIRDGKGDFPMDCPLHDSLLHVHYKGTVLNEEKRVFYDTRVDNDGQPLDFCSGEGLVPEGFELCVRLMLPGEMALVTCPPDYAYDKFPRPSNVPEGAHIQWEIELLSFEMPKDWTGMDFISIMNEAENIRNTGNRLFKEGKYELAKAKYEKVLREFNHVNPQDDEEGKVFSDTRNLLQLNVAACYLKLGECRKSIETCNKVLEANPAHVKGLYRRGMAYMGNGDFEEARADFKMMMKVDKSTESDATAALLKLKQKEQEVEKKARKQFKGLFDKKPGEIAEVKANEDENQVTSEIQKDGEVQGDSSDGTNSEDSHEAAPGADQRGWFAHFWPTGSRILSSLGLQRCTIL* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2509 624 Gene3D - 151 261 IPR046357 GO:0003755
Mal4g2509 624 MobiDBLite consensus disorder prediction 11 29 - -
Mal4g2509 624 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 175 258 IPR001179 GO:0003755
Mal4g2509 624 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 49 145 IPR001179 GO:0003755
Mal4g2509 624 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 293 381 IPR001179 GO:0003755
Mal4g2509 624 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 52 148 IPR001179 GO:0003755
Mal4g2509 624 SUPERFAMILY FKBP-like 12 153 - -
Mal4g2509 624 Gene3D Tetratricopeptide repeat domain 389 544 IPR011990 GO:0005515
Mal4g2509 624 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE PASTICCINO1 70 575 IPR031135 GO:0030154|GO:0042761|GO:0099402
Mal4g2509 624 SUPERFAMILY FKBP-like 252 383 - -
Mal4g2509 624 MobiDBLite consensus disorder prediction 554 569 - -
Mal4g2509 624 MobiDBLite consensus disorder prediction 554 596 - -
Mal4g2509 624 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 176 261 IPR001179 GO:0003755
Mal4g2509 624 SUPERFAMILY FKBP-like 153 260 - -
Mal4g2509 624 Coils Coil 521 541 - -
Mal4g2509 624 SUPERFAMILY TPR-like 399 539 IPR011990 GO:0005515
Mal4g2509 624 SMART tpr_5 484 517 IPR019734 GO:0005515
Mal4g2509 624 SMART tpr_5 450 483 IPR019734 GO:0005515
Mal4g2509 624 SMART tpr_5 401 434 IPR019734 GO:0005515
Mal4g2509 624 Gene3D - 4 150 IPR046357 GO:0003755
Mal4g2509 624 Gene3D - 262 388 IPR046357 GO:0003755
Mal4g2509 624 ProSiteProfiles TPR repeat profile. 484 517 IPR019734 GO:0005515
Mal4g2509 624 Pfam Tetratricopeptide repeat 485 508 IPR019734 GO:0005515
Mal4g2509 624 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 292 384 IPR001179 GO:0003755
Mal4g2509 624 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 70 575 - -
Mal4g2509 624 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2509 Mal-Chr4 67079732 67092523 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2509 35 549 Calmodulin-binding Proteins AT5G48570 30.038 2.97e-61 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2509 - - gmx:100818201 1066.22