Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1210 ATGAAAATAGCAGTAGAAATGAAGAATGAAACTGTGTGCAAGAAGCCAGAGGAAATGGAACATGGAGAAGAAGAAGAAGAACCAGAAGAGAGTATGAAATGGGTAAAACATTACTCTAGTGATCATCAAATACTGTTGGTGGGTGATGGTGATTTTTCATTCTCCCTTTGCCTCGCCAACGCTTTTGGTTCCGCTGCCAACATCGTTGCTACCTCTCTTGATTCCTATGATGATGTTACCAGGAAGTACAAGCAAGCAAAGTCAAATTTAGATCAATTGCAGAAGCTGGGAGCATGCTTGTTACATGGAGTGGATGCAACCAAAATGAAGCTTCATTCAGACTTAAAAATGCGACGGTTTGATCAAATTATATTCAACTTCCCACATGCTGGCTTTTATGGGAAGGAGGATAACTTGCTAATGATTAAGATGCATAAAGACCTTGTGTTTGGTTTCTTCAAGAATGCTAGTTGCATGCTCAGAGCCAATGGTGAAATTCATGTGAATCATAAAACTACAACTCCTTTTAACAACTGGAACATAGAGAAGCTTGCTATGCAAAGCTTTCTGACACTGATTGAATGCTCTGACTTCAAGAAGGAAGACTACCCGGGTTATAACAATAAGCGTGGTGATAGCAATAGATGTGATGAGCCCTTTCCACTTGGTAAGTGCAGCACATTTAAGTTCATTTACAATCCTAAAGCCAGGAGAAACTGGAACAAGATAAGTCATACGATGTTTCCCAAAGAACAAACCAGACTTCCCTTACAAGAGATTCAAGATGCTGCGGAGCAATTTCCAACTCCCATTAATCCCCATTATTATCCTCAAACATGTCACATTCCAAGAATGAATGAAGCAATGACATCAAAACTTGATTTGACATGTGGACAACCTCCAATATCTAGGGACTACTTCAACAATGTGGAAACAGTGCACAAAAGAACTCCTCCTTCTGTTGGTTATCATCCTTATGCACATGGTATCAATTTGGGCTCTCCGAGATCGTTGCAGCCGAGGAACTCATTTCAATCTTTGCAACCGTGGCCAACATCAACTAATGCTAGATATTCTCAGATAGATCATGTTGGGACAATTGATAATGTTCCTTTATCACATACTGCTAGAAATGTAGACTATCAAGTCTTTGGTGGCAGCTCAAACTATTTGCCGGAAGCACCTTGTAGAAGAGCTCAGAGGTCAAGTTACTTTGATGTTGGGACAAGGGACCCTGTTCCTTTATCACATAGTGCTAGAAATGAAGACTACCATGTCTATGATGGCAGCTCAAACTATTTGCCAGAAGCTCCTTATAGAACAGTTAAGAGTTCTTATTTTGATATTGGAACAAGGGACACTGTTCCTTTATCATATGGCGCTAGAAATGAAGACTACCAGGCTTTTGGTGGCTGCCCAAATTATTTGCAGGAAGTAGCATCTTGTAGAACAGCTCAGAGGTCAAGTTATTTTGACAGTGTGAGATCTGACTTTGAGAGGTACATTACTGAACAGATTGGAAGGAGGACTTTGAATGCTGACATCTATAATGAGCCTCACTGA 1563 0.4037 MKIAVEMKNETVCKKPEEMEHGEEEEEPEESMKWVKHYSSDHQILLVGDGDFSFSLCLANAFGSAANIVATSLDSYDDVTRKYKQAKSNLDQLQKLGACLLHGVDATKMKLHSDLKMRRFDQIIFNFPHAGFYGKEDNLLMIKMHKDLVFGFFKNASCMLRANGEIHVNHKTTTPFNNWNIEKLAMQSFLTLIECSDFKKEDYPGYNNKRGDSNRCDEPFPLGKCSTFKFIYNPKARRNWNKISHTMFPKEQTRLPLQEIQDAAEQFPTPINPHYYPQTCHIPRMNEAMTSKLDLTCGQPPISRDYFNNVETVHKRTPPSVGYHPYAHGINLGSPRSLQPRNSFQSLQPWPTSTNARYSQIDHVGTIDNVPLSHTARNVDYQVFGGSSNYLPEAPCRRAQRSSYFDVGTRDPVPLSHSARNEDYHVYDGSSNYLPEAPYRTVKSSYFDIGTRDTVPLSYGARNEDYQAFGGCPNYLQEVASCRTAQRSSYFDSVRSDFERYITEQIGRRTLNADIYNEPH* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1210 520 Coils Coil 76 96 - -
Lja6g1210 520 MobiDBLite consensus disorder prediction 12 31 - -
Lja6g1210 520 Pfam rRNA (uridine-N3-)-methyltransferase BTM5-like 45 210 IPR019446 GO:0070042|GO:0070475
Lja6g1210 520 PANTHER PHENYLALANYL-TRNA SYNTHETASE 8 285 - -
Lja6g1210 520 PANTHER OS09G0479400 PROTEIN 8 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1210 Lja-Chr6 35631294 35633523 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1210 - - gmx:100802899 539.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1210 6 35631294 35633523 Lja6g1210 6 35631294 35633523 ECH