Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1648 ATGAAGAAAAACAACAACAACATAAGTCAGTGTTTTTGTATTAGTTCATTATTTGTGTTCTTGTTATCAATGGAGCTTATCCTAGCAGCAGATTTTAAGCCAACAGATAAAATCTTACTGAGTTGTGGTGGTCCTCCATCTAGCACTGATGCTGATGGAAGGGATTGGACCACTGATATTGGTTCGAAGTTCGAATCATCTTCAGCTGCCGGAAAAAACTCCACAACATCTCCGGCCGCCACTCAAGATCCTGCAGTCCCTGAGGTGCCATACATGACAGCCCGCGTGTTCTATTCGCGGTTCACATACACGATTCCAGTGGCCTCCGGTTGGAAATTCCTCCGCCTGTACTTTTACCCTGCTTCATATGCAGGCCTCAATGCATCAAATGCCTTGTTCAGTGTCACGGCACAGCAATCATACACCCTGCTTAGGAACTTCAGTGTGGCACAGACCACACTGGCATTGAATTATGCTTACATTGTGAAGGAGTATGTGATACACGTTGAGGGGGAAACATTGAATGTGACTTTTGTTCCATCTCTCAATGCATCAAATTCATATGCATTTGTGAATGGGATTGAAGTGGTGTCTATGCCAGATATTTATACATCTAGTGATAGTAGTAGTACTATGATTGTTGGTACAGATGCTCCTTTTACTATTGATAACAGCACCACACTTGAGAATGTTTACAGGTTAAATGTCGGAGGGAATGATATCTCGCCTTCTCATGATACTGGTCTTTTCAGATCATGGTCTGATGATGTGCCTTACCTCTTTGGTGCTGCATTTGGAGTTACCGAGCCAGCTGATCCATCTGTGAACATTGAGTACCCCCCGGGCACACCGAGTTATATTGCTCCCAATGATGTTTACACTACAGCCAGATCAATGGGTCCAAACCCTCAAATCAACTTGAATTACAACCTTACGTGGCTTTTCTCTATTGATTCGGGGTTTTCCTATCTTGTGAGACTCCATTTCTGCGAAGGCTCAACAAATATAACCAAGGTCAACCAAAGGGTGTTTGATATTTTCCTCAATAATCAAACTGCTCAGCCTGGTGGTGCTGATGTTATAGCATGGGCAGATGCTTTCAGCCTTTCACATTCAAATGGCATTCCAGTCCATAAAGATTATGTTGTGTTTGTTCCCAATGGAGAGCCGAGGCAGGTTCTGTGGCTTGCACTGCATCCAGATCAAACCTCGAAGCCGCAGTATTATGATGCAATCTTGAATGGAGTTGAGATATTCAAGATTAACGATACTACTGGTAATCTTGGTGGGACAAATCCTATTCCACCTCCTTTGCAAGATAAGATTGATCCTTCATTGGCTCGGTCACATCCTCATGGTAAATCAACGAGTCGAATAGGTGTGATTGCTGGAGGTATCAGCGGAGGAGTTGTTTTATTACTACTTGTCACTGGACTATTTGCTTTTGTGTGTCGCGGTAGGCATGGAAAGGAGTCTAGTACAAGTGAAGGTCCATCTGGCTGGCTTCCACTTTCTCTCTACGGCAATTCACACTCTGCAGGTTCTGCCAAGACAAACACAACAGGAAGTTATGCATCTTCGCTCCCATCAAACCTTTGCAGACACTTCTCATTTGCTGAAATCAAAGCTGCTACAAACAACTTTGATGATGCTTTAATTCTCGGGGTGGGAGGATTTGGTAAGGTTTACAAAGGAGAAGTTGATGGTGGAACAACAAAAGTTGCAATTAAACGTGGGAATCCGCTATCTGATCAAGGGGTTCATGAGTTCCAAACTGAGATTGAAATGCTCTCAAAGCTTCGACACCGTCACCTTGTTTCACTGATTGGCTACTGTGAGGAGAACACTGAAATGATCCTTGTCTATGACTACATGGCCTATGGAACACTCAGGGAGCATCTATACAAGACTCAGAAACCACCACTTCCATGGAAGCAAAGGCTTGAGATATGCATTGGAGCTGCTCGGGGGTTGCATTATCTACACACTGGTGCTAAACACACTATAATCCACCGTGATGTGAAGACAACAAACATTTTACTGGACGAGAAGTGGGTGGCTAAGGTTTCTGATTTCGGATTGTCGAAAACAGGTCCAACATTGGATAACACACATGTGAGCACTGTGGTGAAGGGTAGTTTCGGGTACTTGGATCCTGAATACTTCAGGAGGCAGCAACTTACTGATAAGTCTGATGTTTACTCTTTCGGTGTGGTTCTGTTTGAGATATTGTGTGCTCGTCCTGCTTTGAATCCAACACTTGCTAAGGAGCAAGTGAGTCTAGCTGAGTGGGCACCACATTGTTATAAAAAGGGTACTCTTGATCAAATCATGGATCCTTTTCTCAAGGGCAAGATAACACCAGAATGCTTTAAGAAGTTTGCTGAGACCGCAATGAAGTGTGTGTCTGATCAGGGTATTGAAAGGCCTTCCATGGGTGATGTGTTGTGGAACCTTGAGTTTGCATTGCAGCTGCAAGAAAGTGCTGAAGAGAGTGGTAAGGATTTCGGTGGAAAAACGATGCTGAATGAAGAGGAGACTTTGTTTAGTGGTGATGATTGTAAAGGGAAGAAAGACACTGATGCAAGTAATGTTAGTGATTCAAGAAGCAGTGGCATGAGTATGAGCATTGGTGGTAGAAGCTTGGCAAGTGAAGACTCTGATGGATTAACACCTAGTGCTGTGTTTTCTCAGATCATGAATCCAAAGGGGCGTTAA 2718 0.4367 MKKNNNNISQCFCISSLFVFLLSMELILAADFKPTDKILLSCGGPPSSTDADGRDWTTDIGSKFESSSAAGKNSTTSPAATQDPAVPEVPYMTARVFYSRFTYTIPVASGWKFLRLYFYPASYAGLNASNALFSVTAQQSYTLLRNFSVAQTTLALNYAYIVKEYVIHVEGETLNVTFVPSLNASNSYAFVNGIEVVSMPDIYTSSDSSSTMIVGTDAPFTIDNSTTLENVYRLNVGGNDISPSHDTGLFRSWSDDVPYLFGAAFGVTEPADPSVNIEYPPGTPSYIAPNDVYTTARSMGPNPQINLNYNLTWLFSIDSGFSYLVRLHFCEGSTNITKVNQRVFDIFLNNQTAQPGGADVIAWADAFSLSHSNGIPVHKDYVVFVPNGEPRQVLWLALHPDQTSKPQYYDAILNGVEIFKINDTTGNLGGTNPIPPPLQDKIDPSLARSHPHGKSTSRIGVIAGGISGGVVLLLLVTGLFAFVCRGRHGKESSTSEGPSGWLPLSLYGNSHSAGSAKTNTTGSYASSLPSNLCRHFSFAEIKAATNNFDDALILGVGGFGKVYKGEVDGGTTKVAIKRGNPLSDQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENTEMILVYDYMAYGTLREHLYKTQKPPLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDNTHVSTVVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEILCARPALNPTLAKEQVSLAEWAPHCYKKGTLDQIMDPFLKGKITPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQLQESAEESGKDFGGKTMLNEEETLFSGDDCKGKKDTDASNVSDSRSSGMSMSIGGRSLASEDSDGLTPSAVFSQIMNPKGR* 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1648 905 CDD STKc_IRAK 554 820 - -
Lan11g1648 905 Gene3D Phosphorylase Kinase; domain 1 510 624 - -
Lan11g1648 905 MobiDBLite consensus disorder prediction 64 83 - -
Lan11g1648 905 SUPERFAMILY Protein kinase-like (PK-like) 522 821 IPR011009 -
Lan11g1648 905 PANTHER OS07G0166700 PROTEIN 23 883 IPR045272 GO:0004714|GO:0006468
Lan11g1648 905 ProSiteProfiles Protein kinase domain profile. 548 822 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1648 905 Gene3D - 38 199 - -
Lan11g1648 905 Gene3D - 227 422 - -
Lan11g1648 905 Pfam Protein tyrosine and serine/threonine kinase 554 816 IPR001245 GO:0004672|GO:0006468
Lan11g1648 905 MobiDBLite consensus disorder prediction 848 905 - -
Lan11g1648 905 ProSitePatterns Protein kinases ATP-binding region signature. 554 577 IPR017441 GO:0005524
Lan11g1648 905 SMART serkin_6 548 822 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1648 905 MobiDBLite consensus disorder prediction 848 864 - -
Lan11g1648 905 MobiDBLite consensus disorder prediction 64 82 - -
Lan11g1648 905 MobiDBLite consensus disorder prediction 865 898 - -
Lan11g1648 905 Pfam Malectin-like domain 40 421 IPR024788 -
Lan11g1648 905 ProSitePatterns Serine/Threonine protein kinases active-site signature. 669 681 IPR008271 GO:0004672|GO:0006468
Lan11g1648 905 PANTHER - 23 883 - -
Lan11g1648 905 Gene3D Transferase(Phosphotransferase) domain 1 625 842 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1648 Lan-Chr11 32116811 32120093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1648 26 905 Receptor kinase-like Gene Family AT3G51550 74.379 0.0 1301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lan11g1648 Malectin_like 4.6e-40 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1648 - - lang:109325091 1603.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g1424 7 19716658 19719601 Lan11g1648 11 32116811 32120093 LSH
Lan11g1648 11 32116811 32120093 Lan13g1202 13 17622956 17626463 LSH