Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1358 ATGCACTTCACTTTGTTGCACACTTACACTTGCCCCCACTTTGGTGTTTGCAACAGCAGCAACACCATTTTCTTTCACTCACTGGATGATGCCATGTCTCTCTCACACCTCACCACTCCTCTCTGCTGCACTTCTTCAACTTCAGATTCTTTGCTGACCGCGTCATGTGTGAAGAAGAAAATGAACAGTACAGCCTTGTGCCATGAGGCCTCCAAAGAAAGAATCAGGAAATTGTTTAACAAGGTTGAACTTTCTGTTTCTTCATATGATACCGCTTGGGTGGCAATGATTCCCTCTCCGGCTTCTCCTCATACCCCATTTTTCCCTCAGTGCTTAAATTGGTTGTTGTATAATCAACTCTTAGATGGTTCCTGGGGTCTTCCAGATCGCCATCCATTATTGATGAATGATGCTCTCTTGTCTACCTTAGCAAGCATCCTTGCATTAAAGCAATGGGGTGTTGGTGAAGATCAAATTAATAGGGGTCTTCGTTTTATTCAATCAAACATTACTTCAATCAATGATGAGAATCAACACCCTCCCATAGGATTTGGTATACTTTTTCCTTCTATGATTGAATATGCACAAAATTTGGGCATTAACCTCCCAATTGGAGCTACAAGCTTGGAAGCAATGATCCAGAAGAGAGAAATAGAGCTCCACAGAGGTAGTCAAAGCAATTCAGATGGGAGGAGAGCATATCTAGCATATGTTTCAGAAGGAATGCTGGAATCACAAGACTGGAAATCAATCATGAAATATCAAAGAAAGAATGGATCGTTGTTTAACTCACCTGCTACAACGGCAGCTGTTTTTCAGTGCCATAAGAATGCTGAATGTCTTGGTTACCTCCAATCCGTATTAGAAAAGTTTGAAAATGCAGTTCCGACAACTTATCCTCTGGATATATATGCCCGTCTCTGTATGATTGATAGTCTTGAAAGGTTGGGTATTAATCATCATTTCAAAGAGGAAATTCGAAGTGTATTGGATGAAATATTCAGATATTGGATGCAAGGAGTGGAAGATATATTCTTAGACCCCACCACCTGTGCAATGGCATTTCGTATGTTGCGTCTCAATGGCTATGATGTATCTTCAGATCCATTTTATCAATATTCTGAAGATAAATTTGCTGAATCCTTGAAAGGGTACTTGAAGGATGTTGGTGCTGTTATAGAGCTATATAGGGCTTCACAAGCCATTATACATCCCGATGAATCAATTTTGGTGAGACAAAGTTTGTGGACAAAACATCTTCTGAAGCAGGAATCCTCCCCTTACAGATTATATGCTGATAAACTTCGTAGTTATGTTGACCTAGAGATCAAGGATGTTCTTAATTTTCCTTATCATGCAAATTTGGAGCGATTGTTAAACAGGAGATCAATGGAGCATTACAACACAGTAGAAACAAGAATTTTAAAAGCATCATATAGATCTTGCAATCTTGCAAACCAAGAAATTCTAAAGCTAGCAGTAGAAGACTTCAATATCTGCCAAGCGATACACATTGAAGAGTTGAAACAGCTTTCAAGGTGGGTTGTTGAGAGAAGACTAGACACACTAAAATTTGCAAGGCAGAAACTGGCTTATTGTTACTTCTCCTGTGCAGCTACTATTTTCTCCCCTGAACTTTCTGATGCTCGCATATCATGGGCGAAAAGTGGGGTGCTCACAACAGTTGTTGATGATTTCTTTGATGTTGGGGGTTCTGAAGAGGAACATGTGAATCTTATTCAACTAGTTGAGAAGTGGGATGTAGATATCAATACTGTTTGTTGTTCTGAGACAGTTAAGATAATATTTTCCGCAATTCACAGCACAGTTTGTGAGATTGGAGAGAAATCAGTCAAGCAGCAAGGACGCAATGTGAAAAACAATGTTATCAAAATTTGGTTGAATTTGGTCCAGTCAATGTTTAGAGAAGCTGAGTGGTTGAGAACCAAGACTGTGCCAACAATTGGTGACTATATGGAAAATGCATACATATCATTTGCCTTAGGACCAATTGTCCTTCCGGCCCTCTATCTGGTTGGACCTAAGCTTTCAGATGAAGTCACAGAAAATCATGAGTTGAACTATCTCTATAAGCTCATGAGCACATGTGGCCGTCTTCTTAATGACATTCACAGTTTTAAGAGAGAATCCGAGGAAGGGAAATTGAATGTGCTGGCTTTGCGTATTGCTCATGGCAATGGAGTTATTACTGCAGAAGATGCCACCGAAGAAATGAAGGGTATTGCTGAAGAAAAGAGAAGAGAACTCCTGAGATTAATTTTGCAGGAAAAAGGAAGTGTAGTTCCCAGAGAGTGCAAGGATTTGTTTTGGAAAATGATAAAAGTGTTGCACCTGTTTTACATGAAGGATGATGGATTTACTTCACACGAGATGCACTCTAGTGTAAATGCAGTACTTAAAAAACCTGTCATCCTTAATGAATTGTTAGTACATTCTCAGCAGAACCTTAGTCCTGTCAAAGCCACTAATGACCTGATGCTCTAG 2505 0.3972 MHFTLLHTYTCPHFGVCNSSNTIFFHSLDDAMSLSHLTTPLCCTSSTSDSLLTASCVKKKMNSTALCHEASKERIRKLFNKVELSVSSYDTAWVAMIPSPASPHTPFFPQCLNWLLYNQLLDGSWGLPDRHPLLMNDALLSTLASILALKQWGVGEDQINRGLRFIQSNITSINDENQHPPIGFGILFPSMIEYAQNLGINLPIGATSLEAMIQKREIELHRGSQSNSDGRRAYLAYVSEGMLESQDWKSIMKYQRKNGSLFNSPATTAAVFQCHKNAECLGYLQSVLEKFENAVPTTYPLDIYARLCMIDSLERLGINHHFKEEIRSVLDEIFRYWMQGVEDIFLDPTTCAMAFRMLRLNGYDVSSDPFYQYSEDKFAESLKGYLKDVGAVIELYRASQAIIHPDESILVRQSLWTKHLLKQESSPYRLYADKLRSYVDLEIKDVLNFPYHANLERLLNRRSMEHYNTVETRILKASYRSCNLANQEILKLAVEDFNICQAIHIEELKQLSRWVVERRLDTLKFARQKLAYCYFSCAATIFSPELSDARISWAKSGVLTTVVDDFFDVGGSEEEHVNLIQLVEKWDVDINTVCCSETVKIIFSAIHSTVCEIGEKSVKQQGRNVKNNVIKIWLNLVQSMFREAEWLRTKTVPTIGDYMENAYISFALGPIVLPALYLVGPKLSDEVTENHELNYLYKLMSTCGRLLNDIHSFKRESEEGKLNVLALRIAHGNGVITAEDATEEMKGIAEEKRRELLRLILQEKGSVVPRECKDLFWKMIKVLHLFYMKDDGFTSHEMHSSVNAVLKKPVILNELLVHSQQNLSPVKATNDLML* 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1358 834 Gene3D - 79 497 IPR036965 GO:0010333|GO:0016829
Gso8g1358 834 Gene3D - 85 288 - -
Gso8g1358 834 CDD Terpene_cyclase_plant_C1 285 806 IPR044814 GO:0010333|GO:0016102
Gso8g1358 834 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 78 807 - -
Gso8g1358 834 SFLD Terpene Cyclase Like 1 N-term 59 480 - -
Gso8g1358 834 PANTHER ENT-KAUR-16-ENE SYNTHASE, CHLOROPLASTIC 78 807 - -
Gso8g1358 834 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 257 468 IPR008930 -
Gso8g1358 834 Pfam Terpene synthase, N-terminal domain 247 426 IPR001906 GO:0010333|GO:0016829
Gso8g1358 834 SUPERFAMILY Terpenoid synthases 486 810 IPR008949 -
Gso8g1358 834 Gene3D Farnesyl Diphosphate Synthase 500 817 IPR008949 -
Gso8g1358 834 Pfam Terpene synthase family, metal binding domain 490 755 IPR005630 GO:0000287|GO:0010333|GO:0016829
Gso8g1358 834 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 88 278 IPR008930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1358 Gso-Chr8 12992265 12999373 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1358 K04121 - gmx:100793849 1629.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g1358 8 12992265 12999373 Gso8g1358 8 12992265 12999373 ECH