Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3405g00002 ATGGTCGTCACCACCCAACGAAGGAGCTGCTGCACCTTCTCTCTCTCTCTTCTCCTTCTATTCATCGCCGTCTTCCAAACCCTAAACCCAAATCCCTCGCCGCCACCTCACCACCATGGCAACTACATCGTGGGGTTCTCGGAGTACAAGAGCGCCGAGCACCACCGCGCCTATCTGGAATCCAGCCTCGGATCAAAAGGGTGGTGGTGGATTGACCGGCGGAACCCGGCGGCGAAGTACCCCACCGATTTTGGATTGGTTTCCGTTGAGGATTTGGGGTTGATTGAGGTGATTCGGAAACTGGGTTTGGTGAAGTACGTGAGTTTGGATATGAGTTATAAGAGGGGTTTGATGAAGCATCATGAGAGGGATAAGAAAGTTGGTGCCTTTGTGGATGGGAAGAAGCGCCCCGGGAAAATCTTCACGACGATGTCGTTTTGTGAGGCAGAAGAAGGAGAAGAAGAAGAAGAAGATATTCGCAACAATTCAATCAAGTTGGGGCGACAACTGATGATGCAGAGATCGCAAGTTACTTCCATGTTTGGAGCGGAAGATCTTTGGAGGAAAGGGTACACTGGTGCGAAGGTCAAGATGGCCATATTTGATACTGGCATTCGAGCTGATCATCCTCATTTCCGTAATATCAAGGAGCGTACAAATTGGACCAATGAGGATAGATTGAATGACAATCTTGGACATGGGACTTTTGTTGCTGGTGTTATTGCTGGTGTAGATGCGGAGTGCCTTGGTTTTGCACCAGATACAGAGATTTATGCATTTCGTGTTTTCACTGATGCACAGGTGTCATATACATCATGGTTCCTTGATGCCTTCAACTATGCAATCGCAACCAATATGGATGTGCTAAATTTGAGCATAGGTGGACCTGATTATATGGATCTCCCATTTGTTGAAAAGATATGGGAGATAACAGCAAATAACATAATCATGGTTTCTGCAATTGGAAATGATGGACCACTTTATGGAACTTTGAATAATCCCGCAGATCAAAGTGATGTCATTGGAGTTGGTGGCATTGACTATAGTGACCATATAGCCTCCTTTTCCTCACGTGGTATGAGTACCTGGGAGCTTCCTCATGGTTATGGCCGTGTGAAGCCAGACATAGTTGCATATGGACGGGACATTATGGGTTCAAAGATTAGTGCAGGTTGTAAAAGTTTATCAGGAACCAGTGTTGCAAGTCCTGTAGTTGCTGGTGTTGTATGTTTGCTTGTTAGTGTCATTCCTGAACTTGATCGAAAAAATATCGTAAACCCAGCAAGCATGAAACAAGCATTGGTCGAGGGTGCTGTAGAGCTTGATGGGCCTAACATGTATGAGCAGGGTGCTGGCAGGGCTGATCTGTTAGAATCATACAAGATTCTTAAGAGCTACAAACCTAGGGCAAGCATCTTTCCCAGTGTTCTTGATTATACAGATTGTCCTTACACATGGCCTTTTTGTCGTCAGCCACTCTATGCAGGTGCCATGCCTGTCATCTTCAATGCCACCATTTTGAATGGAATGGGTGTTATCGGCTACATTGAAAGTCCCCCAACATGGCATCCTTCTAAAGAAGAAGGGAATCTTCTAAGCATTCATTTTACATATTCTGAGATCATCTGGCCTTGGACTGGTTATTTAGCCCTTCACATGCAAATCAAGGAAGAAGGTGCACAGTTTTCTGGGAATATTGAAGGTAATGTGACTCTCAGGATTTCCAGTCCTCCAGCTCAAGGAGAGAAGGACCCTCGAGTTAGCATCTGTGTGCTTCAAATAAAGTTAAAAGTGGTACCAACACCGCCACGAGCAAAACGAGTATTGTGGGATCAGTTTCACAGTATCAAATACCCTCCAGGTTATATTCCCAGAGATTCCTTGGATGTTCGTAATGACATTCTTGACTGGCATGGGGATCATCTGCATACAAATTTTCACATCATGTTCAACATGTTACGAGATGCTGGTTACTATGTTGAAGCTCTCGGTTCACCTCTTACATGCTTTGATGCTCGACAGTATGGAACACTTCTGTTGGTGGATCTTGAGGAAGAGTACTTTGCTGAGGAAATTGAAAAGCTGAGAGACGATGTTATAAATACTGGATTGGGATTAGCTATCTTCGCTGAGTGGTATAATGTAGATTCAATGGTAAAGATGAGATTCTTTGATGACAATACTCGGAGCTGGTGGACCCCAGTCACTGGAGGTGCTAATATTCCTGCACTTAATGATCTTTTGGCTCCATTTGGGATTGCTTTTGGAGATAAGATTCTGAATGGTGATTTTTCACTTTCCGGTGAGCAGAATCGATATGCTTCTGGAACAGATATAGTGAGGTTTCCAAGGGGTGGTTATGTACATAGCTTTCCTTTCTTGGATAGTTCAGAAAGTGGAGCCACTCAGAATAAGCTACTGACTTCTGGCAAAACCAAGGCAGATTCTCCAATTCTTGGTCTTACAGTGATGGGTGAAGGTCGCATAGCTGTGTATGGGGACTCCAATTGTTTGGACAGCAGCCACATGGTTACTAATTGTTTTAGTCTTCTTAGGAAAATACTAGATTTTACTAGTGAAGATGTTAGAGATCCAGTGCTTTTCTCTGATTCAACTAAACAAAATAATCCCTTGTATGAAGATGATAATCGGTTGCCATCCCGCAGAACTGATGTGAATTTCTCTGCATATTCAGCTGTTATAGGGAAAGAATTGATCTGCAGGACTGACACAAGGTTTGAAATATGGGGAACTATGGGCTTCAATTTACACGTCAGAGGAAGAAACAGAAGATTGCCCGGTTATCCTGTCATTGATTTGGGGAGTGGTTTCAATTCAACCTTTGATGCTTCTTACATTAGGCATCCCAAGTTAACTGTGAGAAATAAGGATGTCTCTCTAGGGAACAGATATTTAGGCCTGTTCTATGGGGATGAGCTTGATGCACCTATATTAGTTGGTAGTCACTGGCTTGTTCCTGTTGTTGTTGCAGCAACTGGTATTTTGCTATTGAGTTTTTGGCGAATTCGCCAAAAGAGACGTCGACGAAGGAAAGGATCAAGTTTGTTGGCCAATTTATAG 3081 0.4372 MVVTTQRRSCCTFSLSLLLLFIAVFQTLNPNPSPPPHHHGNYIVGFSEYKSAEHHRAYLESSLGSKGWWWIDRRNPAAKYPTDFGLVSVEDLGLIEVIRKLGLVKYVSLDMSYKRGLMKHHERDKKVGAFVDGKKRPGKIFTTMSFCEAEEGEEEEEDIRNNSIKLGRQLMMQRSQVTSMFGAEDLWRKGYTGAKVKMAIFDTGIRADHPHFRNIKERTNWTNEDRLNDNLGHGTFVAGVIAGVDAECLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATNMDVLNLSIGGPDYMDLPFVEKIWEITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYSDHIASFSSRGMSTWELPHGYGRVKPDIVAYGRDIMGSKISAGCKSLSGTSVASPVVAGVVCLLVSVIPELDRKNIVNPASMKQALVEGAVELDGPNMYEQGAGRADLLESYKILKSYKPRASIFPSVLDYTDCPYTWPFCRQPLYAGAMPVIFNATILNGMGVIGYIESPPTWHPSKEEGNLLSIHFTYSEIIWPWTGYLALHMQIKEEGAQFSGNIEGNVTLRISSPPAQGEKDPRVSICVLQIKLKVVPTPPRAKRVLWDQFHSIKYPPGYIPRDSLDVRNDILDWHGDHLHTNFHIMFNMLRDAGYYVEALGSPLTCFDARQYGTLLLVDLEEEYFAEEIEKLRDDVINTGLGLAIFAEWYNVDSMVKMRFFDDNTRSWWTPVTGGANIPALNDLLAPFGIAFGDKILNGDFSLSGEQNRYASGTDIVRFPRGGYVHSFPFLDSSESGATQNKLLTSGKTKADSPILGLTVMGEGRIAVYGDSNCLDSSHMVTNCFSLLRKILDFTSEDVRDPVLFSDSTKQNNPLYEDDNRLPSRRTDVNFSAYSAVIGKELICRTDTRFEIWGTMGFNLHVRGRNRRLPGYPVIDLGSGFNSTFDASYIRHPKLTVRNKDVSLGNRYLGLFYGDELDAPILVGSHWLVPVVVAATGILLLSFWRIRQKRRRRRKGSSLLANL 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3405g00002 1026 ProSiteProfiles Serine proteases, subtilase domain profile. 169 463 - -
Gabi3405g00002 1026 Pfam Subtilase family 194 442 IPR000209 GO:0006508|GO:0008236
Gabi3405g00002 1026 Gene3D Peptidase S8/S53 domain 169 461 IPR036852 GO:0004252|GO:0006508
Gabi3405g00002 1026 CDD Peptidases_S8_SKI-1_like 187 443 IPR034185 -
Gabi3405g00002 1026 FunFam subtilisin-like protease SBT6.1 165 459 - -
Gabi3405g00002 1026 ProSitePatterns Serine proteases, subtilase family, histidine active site. 233 243 IPR022398 -
Gabi3405g00002 1026 SUPERFAMILY Subtilisin-like 176 455 IPR036852 GO:0004252|GO:0006508
Gabi3405g00002 1026 ProSitePatterns Serine proteases, subtilase family, serine active site. 397 407 IPR023828 -
Gabi3405g00002 1026 PRINTS Subtilisin serine protease family (S8) signature 396 412 IPR015500 -
Gabi3405g00002 1026 PRINTS Subtilisin serine protease family (S8) signature 193 212 IPR015500 -
Gabi3405g00002 1026 PRINTS Subtilisin serine protease family (S8) signature 229 242 IPR015500 -
Gabi3405g00002 1026 PANTHER PEPTIDASE S8 30 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3405g00002 Gabi-Chr3405 5595 11857 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3405g00002 267 1007 Subtilisin-like Serine Gene Family AT5G19660 78.629 0.0 1233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3405g00002 K08653 - gmx:100819188 1781.92