Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0646 ATGCTTTCTCTTCCACCCCCAGCCTCACCTCCACCCTCAAAGAAAACCAAACCAATCTCTCTTGACCAAATTGTCATATCGAAACAACCAAGGAACCAAAGTTCTTTGGAATCAGATGCAAAAAATTCTCCTACAACAAAGTTAAGCAGGCCAACAACCACACTAAGACAACCTGTACCTAAGAGGACCAACCCCATCATATGGTTTGCTGCAGTTTTGTGCCTCATATTCAGCCTTGTGCTTATATCCTTTGGAGTTGCAACTTTGATCATCTTCCTTGCCATCAAACCAAGAACCCCTTTATTTGACATCCCCAATGCAAACCTCAATGTTGTGTATTTTGACTCGCCAGAATACTTCAATGGCGACTTCACCCTCCTTGCAAACTTCTCCAACCCCAACAGGAGAATTGATGTGAGATTTGAGTCCTTGGATGTTGATCTTTTCTTCTCAGACAGGCTCATATCAGCGCAGTCAATAGAGCCATTTACTCAGAGGAGAAGGGGAAGCAAGTTGCAATCAGTGCACTTCATATCTAGCTTGGTGTTTCTGCCTCGGGATCTTGGTGTGAAGCTTGAAAGGCAGGTGCAAAGTAACAGGGTCAACTACAATGTGAGAGGAACATTTAAAGTGAAACTTACTTTAGGTCTCATCCATATATCTTACTTGTTGCATAGCAGATGCCAGATAGAGATGACTAGTCCACCAACTGGTGTACTAGTTGCCAGGAAGTGCATGACAAAGAGATGA 750 0.4333 MLSLPPPASPPPSKKTKPISLDQIVISKQPRNQSSLESDAKNSPTTKLSRPTTTLRQPVPKRTNPIIWFAAVLCLIFSLVLISFGVATLIIFLAIKPRTPLFDIPNANLNVVYFDSPEYFNGDFTLLANFSNPNRRIDVRFESLDVDLFFSDRLISAQSIEPFTQRRRGSKLQSVHFISSLVFLPRDLGVKLERQVQSNRVNYNVRGTFKVKLTLGLIHISYLLHSRCQIEMTSPPTGVLVARKCMTKR* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0646 249 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 32 249 - -
Dod05g0646 249 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 32 249 - -
Dod05g0646 249 MobiDBLite consensus disorder prediction 20 57 - -
Dod05g0646 249 MobiDBLite consensus disorder prediction 1 57 - -
Dod05g0646 249 Pfam Late embryogenesis abundant protein 131 220 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0646 Dod-Chr5 9669972 9670903 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0646 - - gmx:100803431 354.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0646 05 9669972 9670903 Dod05g0646 05 9669972 9670903 ECH
Dod05g0646 05 9669972 9670903 Dod08g0128 08 1487927 1489246 PCT