Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01172 ATGCTTGCCACCCTCCCACCCCCACCTCCACCTCCTCTTTCACCTTCACCACCCAGAAAGCAAACCAAGCCAGTCCCTCTTGACCAAATAATCATATCAAAACAGTCCAAAAATCAGTGTTCTTTAGATCCAGAAGCACCAAATTCAGTGACAAGGAAGGAAAGTAGGCCACCAACACTTAGGGGACCAAAGCTTCAACGTACCAACCCAGTTGTCTGGTGTACTGCTGTGTTGTGCCTCATATTCAGCCTGATTCTGATCTTATTTGGAGTTGCAACTTTGATAATCTTCCTTACTTTCAAGCCAAGAAACCCCTTATTTGACATTCCCAATGCGAGCCTCAATGCTGTGTACTTTGATTCACCACAGTATTTCAATGGAGACTTCATTCTCCTAGCAAATTTCTCAAACCCCAACAGgaaaatggatgtgaaatttGAGTCTTCTGATATTGAGCTTTTCTTCTTAGACAGGCTCATATCGAGTCAGGCAATTCAGCCTTTCACGCAGAGGCGACGTGAAAATAGGTTGCAGACAGTTCACTTCATATCCAGCTTAGTGTTTTTGCCTCAAGATGTTGGTGTGAATCTTCAAAGGCAAGTACAAAGCAACAAGGTGGAATATAATGTAAGGGCAACTTTTAGAGTGAGGGTGTATCTGGGTCTCTTCCATTTAAGGTACTGGCTTCACAGCAGATGCCAGTTAGAGATAACTGGTCCACCAACTGGTGTTCTAGTTGCCAGAAGATGCATAACAAAGAGATG 764 0.4293 MLATLPPPPPPPLSPSPPRKQTKPVPLDQIIISKQSKNQCSLDPEAPNSVTRKESRPPTLRGPKLQRTNPVVWCTAVLCLIFSLILILFGVATLIIFLTFKPRNPLFDIPNASLNAVYFDSPQYFNGDFILLANFSNPNRKMDVKFESSDIELFFLDRLISSQAIQPFTQRRRENRLQTVHFISSLVFLPQDVGVNLQRQVQSNKVEYNVRATFRVRVYLGLFHLRYWLHSRCQLEITGPPTGVLVARRCITKR 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01172 254 Pfam Late embryogenesis abundant protein 136 233 IPR004864 -
Bva12g01172 254 MobiDBLite consensus disorder prediction 1 62 - -
Bva12g01172 254 MobiDBLite consensus disorder prediction 1 22 - -
Bva12g01172 254 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 41 254 - -
Bva12g01172 254 MobiDBLite consensus disorder prediction 28 55 - -
Bva12g01172 254 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 41 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01172 Bva-Chr12 11200013 11200777 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01172 - - gmx:100803431 340.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01172 12 11200013 11200777 Bva12g02579 12 19162818 19163585 BWGD