Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1719 ATGCTTCCCCTTCCACCACCACCACCACTCCTAGCCACAAGGCAATGTACAAAGCAAGTCTCTCATGACCAAATTATCATATCAAAACAACCCATCAAACAAAATTCTCAAAATTCAGATGCACCAAATAATGTTACAACAAAGTCAATTAGGCCACCACCAACACTAAGACAACCTCAATTTCAAAGGACTAATCCAATCACATGGTTTGCTGCTGTGTTGTGCCTCATATTCAGCCTTCTACTCATCTTCTTTGGAGTAGCAACTTTGATCATCTTCCTTGGCATCAAACCAAGAAACCCAACTTTTGACATCCCAAATGCAAACCTCAATGCGGTGTATTTTGACTCACCAGAATACTTCAATGGTGACTTCACTCTCCTTGCAAATATCACCAATCCAAACAGGAAAATTGATGTGAGGTTTGAGTCTTTGGATGTTGAACTTTTCTTCTCAAACAGGATCATATCAACACAGTCAATTCAACCCTTTAGTCAAAGGAGAAGAGAAAGCAGGTTGGAATCATTGCAGTTCATATCCAGCTTGGTGTTTTTGCCTAAGGATCTTGGTGTGAACCTTAAAAAGCAAGTGCAGGGTAATAGGGTTTGCTACAATGTGAGAGGAACATTTAAAGTGAGAGTTACACTAGGGTTCTTCCATATGTCTTATTGGTTGCATAGTAGATGCCAGATAGAGATGACTGGTCCACCAACTGGTGTCTTGGTAGCTAGGAAGTGCATCACAAAGCGATGA 753 0.4077 MLPLPPPPPLLATRQCTKQVSHDQIIISKQPIKQNSQNSDAPNNVTTKSIRPPPTLRQPQFQRTNPITWFAAVLCLIFSLLLIFFGVATLIIFLGIKPRNPTFDIPNANLNAVYFDSPEYFNGDFTLLANITNPNRKIDVRFESLDVELFFSNRIISTQSIQPFSQRRRESRLESLQFISSLVFLPKDLGVNLKKQVQGNRVCYNVRGTFKVRVTLGFFHMSYWLHSRCQIEMTGPPTGVLVARKCITKR* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1719 250 MobiDBLite consensus disorder prediction 31 57 - -
Apr10g1719 250 Pfam Late embryogenesis abundant protein 130 229 IPR004864 -
Apr10g1719 250 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 29 250 - -
Apr10g1719 250 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 29 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1719 Apr-Chr10 30027501 30028253 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1719 - - gmx:100803431 412.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1719 10 30027501 30028253 Apr9g1864 9 27354802 27355527 PCT