Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00501 ATGCTTTCTCTTCCACCGCCGCCGCCGCCGCCACAGCTCTCACCCCCACCAAGAAAACAATCGAAACCAATTTCACTTGACCAAATTGTCATATCAACAAAACAAACAAGAAACCAAAATTCTATTGAAACAAATGCACCAAATTCTGTTACAACAAAGCTAATTAGGCCACCAAGAACACCACTAAGACAACCTCAACCAAAGAGAACAAATCCAATCATATGGTTCACTGCAGTTCTATGCCTAATATTCAGCCTTGTCCTTATCTTCTTTGGTATTGCAACATTGATAATCTTCCTTATCATAAAACCAAGAACCCCCATTTTTGATATTCCAAATGCAAACCTCAATTTGGTGTACTTTGACTCTCCAAATTACATCAATGGTGACTTCACCCTCCTTGCAAACTTCACCAACCCCAACAAAAAAATCAATGTCCTTTTCGAGTCTTTAGACATCGAGCTCTTCTTCTCTGAGAGGCTCATATCGGCACAGTCGATAGAGCCGTTCCCTCAGAGGAGAAGAGAAAGCAAGTTGCAATCAGTGAACTTCATATCTAGCTTGGTGTTTTTGCCTCAGGATATTGGTGTGAAGCTTCAAAAGCAAGTTCAGAACAATAGGGTAATCTACAATGTGAAGGGAACATTTAGAGTGAAAATCACCATTGGTCTAATTCATGTATCTTATTGGTTGCATAGTAGATGCCAGATTGAGATGACTGGTCCACCAACTGGAGTATTAGTAGCAAGAAACTGCATAACAAAGAGATGA 771 0.4021 MLSLPPPPPPPQLSPPPRKQSKPISLDQIVISTKQTRNQNSIETNAPNSVTTKLIRPPRTPLRQPQPKRTNPIIWFTAVLCLIFSLVLIFFGIATLIIFLIIKPRTPIFDIPNANLNLVYFDSPNYINGDFTLLANFTNPNKKINVLFESLDIELFFSERLISAQSIEPFPQRRRESKLQSVNFISSLVFLPQDIGVKLQKQVQNNRVIYNVKGTFRVKITIGLIHVSYWLHSRCQIEMTGPPTGVLVARNCITKR 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00501 256 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 43 256 - -
Aip01g00501 256 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 43 256 - -
Aip01g00501 256 Pfam Late embryogenesis abundant protein 138 235 IPR004864 -
Aip01g00501 256 MobiDBLite consensus disorder prediction 1 18 - -
Aip01g00501 256 MobiDBLite consensus disorder prediction 1 66 - -
Aip01g00501 256 MobiDBLite consensus disorder prediction 19 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00501 Aip-Chr1 6974744 6975758 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00501 - - gmx:100803431 345.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00501 01 6974744 6975758 Aip01g00501 01 6974744 6975758 ECH
Aip01g00501 01 6974744 6975758 Aip07g00130 07 1009580 1010231 PCT