Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0838 ATGCTTACTCTTCAACCACCTCCTCCAATTCCACCCTCACCCTCAAAGAAAACCAAACCAATCTCTCTTGACCAAATTGTCATATCAAAACAACAAAGGAACCAAAATTCCTCGGAATCAGAAGCACCAAATTCCGCTACAACAAAATTAACAAGGCCTACAACAACACTAAGACAACCTCAACCTAAGAGAACAAACCCTATCACATGGTTTGCTGCAATGTTATGCCTAATTTTCAGCCTTGTACTCATATTCTTTGGTGTCACAACTTTGATAATTTTCCTTGCCATAAAACCAAGAACACCAACATTTGACATACCAAATGCAAACCTCAATGTTGTGTATTTTGACTCACCACAATTCTTCAATGGTGACTTCACCCTCCTTGCAAATTTCTCAAACCCTAACAGGAAAATTGATGTGAGATTTGAGTCTTTAGATGTTGATCTTTTCTTTTCTGATAGGCTCATATCAGCACAATCAATTGAGCCCTTTAATCAGAAGAGTAAGGAAAGCAAGATGCAATCAGTGCATTTTATATCTAGCTTGGTGTTTCTGCCTCAAGATCTTGGTGTGAAACTTCAGAAGCAGGTGCAGAGTAACAGAGTAAATTACAATGTCAGAGGAACATTTAAGGTGAAAATCACTGTTGGACTTATTCATATATCTTACTTGTTGCATAGTAGGTGCCAGATTGAGATGACAAGTCCACCAACTGGTGTATTAGTAGCAAGGAAGTGCATAACAAAGAGATGA 756 0.3823 MLTLQPPPPIPPSPSKKTKPISLDQIVISKQQRNQNSSESEAPNSATTKLTRPTTTLRQPQPKRTNPITWFAAMLCLIFSLVLIFFGVTTLIIFLAIKPRTPTFDIPNANLNVVYFDSPQFFNGDFTLLANFSNPNRKIDVRFESLDVDLFFSDRLISAQSIEPFNQKSKESKMQSVHFISSLVFLPQDLGVKLQKQVQSNRVNYNVRGTFKVKITVGLIHISYLLHSRCQIEMTSPPTGVLVARKCITKR* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0838 251 Gene3D - 93 231 - -
Aev01g0838 251 MobiDBLite consensus disorder prediction 1 63 - -
Aev01g0838 251 Pfam Late embryogenesis abundant protein 133 222 IPR004864 -
Aev01g0838 251 MobiDBLite consensus disorder prediction 1 16 - -
Aev01g0838 251 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 31 251 - -
Aev01g0838 251 MobiDBLite consensus disorder prediction 18 63 - -
Aev01g0838 251 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 31 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0838 Aev-Chr1 8211055 8211810 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0838 - - gmx:100803431 339.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g0838 01 8211055 8211810 Aev01g0838 01 8211055 8211810 ECH
Aev01g0838 01 8211055 8211810 Aev07g0105 07 632578 633315 PCT