LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed3g2616	ATGCTAGCCTCTGTTGAAGAAGAACTTGGCACACCAAAACAACCAAGGAATCAACATTCTCAGCGATCAGAAGCATCAAATTCCCACGCCAACACTAGAGCGATTTTTGGGCAACCTCGACTTCAAAGGACTAAACCAATTATATGGTGTGCTGCAGTGGTGTGCTTCATATTCAGCCTAGGGCTTATCTTCTCTGGAATTGCAACATTGATTCTCTACCTTGCCATGAAACCACGAAACCCCACCTTTGACATTCCCAATGCAAGCCTCAATGTGGTATACTTTGACTCGCCCCAGTACCTCAACGGTGAATTCACTCTGCTTGCAAATTTTTCGAATCCTAACAGGAGAATTGGGGTGAGGTTTGAGTCCTTGAACATCGAGCTTTTCTACTCTGACAGGCTCGTATCATCGCAGACAATGAAGCCTTTTACTCAAAGGCCAAGGGAAACAAGTTTGCAATCAGTGAACTTGATATCCAGCTTAGTGTTTTTGCCTCAAGATGTTGGTGTAAAACTACAAAAGCAAGTGGAGAATAACAGAATAAACTACTATGCAAGGGGAACATTTAAGGTGAGGTTCAATATTGGCCTTATCCATTTATCTTACTCTCTGCATAGCACATGCCAGATAGAGATGACTAGTCCTCCAGCGGGTATTCTAGTAGCCAGACAATGCATAACAAACCGATGA	693	0.4315	MLASVEEELGTPKQPRNQHSQRSEASNSHANTRAIFGQPRLQRTKPIIWCAAVVCFIFSLGLIFSGIATLILYLAMKPRNPTFDIPNASLNVVYFDSPQYLNGEFTLLANFSNPNRRIGVRFESLNIELFYSDRLVSSQTMKPFTQRPRETSLQSVNLISSLVFLPQDVGVKLQKQVENNRINYYARGTFKVRFNIGLIHLSYSLHSTCQIEMTSPPAGILVARQCITNR	230

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed3g2616	230	MobiDBLite	consensus disorder prediction	14	29	-	-
	Aed3g2616	230	PANTHER	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN	17	230	-	-
	Aed3g2616	230	Pfam	Late embryogenesis abundant protein	112	209	IPR004864	-
	Aed3g2616	230	MobiDBLite	consensus disorder prediction	1	29	-	-
	Aed3g2616	230	PANTHER	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	17	230	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed3g2616	Aed-Chr3	28106155	28106847	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed3g2616	-		-	gmx:100810975	431.024

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aed3g2616	3	28106155	28106847	Aed3g2616	3	28106155	28106847	ECH
	Aed4g2339	4	25819763	25820509	Aed3g2616	3	28106155	28106847	PCT