Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00571 ATGTCTCATTACAACAGGGACGAAATGGAGTACGTTGCAGATGATAATGAAATGGCAGAGGTAGAAGATGATGTGTATTTCCGAGGCAGAGCATTTGGTGAATCAGATTCGGATGATGATGATGAATACGATCCTTTGGAAAATCGTATAACAGATACCACTGCCGCAGAAGCTAGGAAGGGAAAGGATATCCAAGGTATACCATGGGATAGACTGAGTATTAGTCGTGAAAAGTATAGACAAACTAGACTAGAGCAGTACAAGAATTATGAAAATATACCACAATCAGGGGAACTTTCGGAGAAGGAATGCAGGCCAACAGATAAAGGAGGAAGATTTTATGATTTCTGGCAGAACACTAGATCTGTGAAGTCAACGATACTTCATTTCCAACTACGGAACTTGGTTTGGTCAACATCGAAGCATGATGTATATCTTGTTTCACATTACTCAATTGTTCACTGGTCTTCGTTGCACTCCAAGAGATCCGAAATCCTGAATGTACAAGGGCATGTGGCTCCGTGTGAGAAACATCCTGGAAGCCTCTTGGAAGGGTTTACTCAAACACAAATTAGTACACTGGCAGTGCGAGACAACTTGTTGATTGCTGGAGGCTTTCAAGGAGAACTTATTTGCAAGTACTTAGATCGACCTGGGGTTAGCTTTTGTTCCAGAACTACTTATGAGGACAATGCGATCACAAATGCTGTCGAGATTTATGAGCATCCCAGGTCTTCATTCTTTTCTTTCTTATCACTCTTTTTTCATTTCATGGCTTCAAATAATGACTGTGGAGTCAGAGACTTTGATATGGAGAAATTTCAGCTTTCCAAGCATTTCTGCTTCCCCTGGCCTGTAAATCATACTTCATTGAGCCCTGATAGTAAACTTCTTGCAATTGTTGGAGACAATCCAGAAGGGCTGCTGGTGGATTCTCAAACTGGAAAGACAATCACGCAGTTATGTGGACACTTGGATTACTCATTTGCATCTGCATGGCATCCTGATGGCCGTATTTTTGCTACCGGGAACCAAGACAAAACTTGCCGTGTCTGGGATGTTCGAAACTTGTCGAAGTCTGTTGCTGTTCTGAAGGGCAACCTTGGAGCTATACGTTCAATACGTTTCACATCTGATGGGCAGTTCATGGCAATGGCTGAGCCAGCTGACTTTGTGCATGTCTTTGACGCAAAGCGTGGATTTGAGAAGGAACAGGAAATTGATTTTTTTGGGGAGATCTCTGGTGTATCTTTCAGTCCGGATACAGAATCACTCTTTATTGGTGTCTGGGACCGCACCTACGGAAGCCTTCTTCAGTACAACCGACACAGAAACTACTCGTATCTTGACTGCTTGTAA 1359 0.4275 MSHYNRDEMEYVADDNEMAEVEDDVYFRGRAFGESDSDDDDEYDPLENRITDTTAAEARKGKDIQGIPWDRLSISREKYRQTRLEQYKNYENIPQSGELSEKECRPTDKGGRFYDFWQNTRSVKSTILHFQLRNLVWSTSKHDVYLVSHYSIVHWSSLHSKRSEILNVQGHVAPCEKHPGSLLEGFTQTQISTLAVRDNLLIAGGFQGELICKYLDRPGVSFCSRTTYEDNAITNAVEIYEHPRSSFFSFLSLFFHFMASNNDCGVRDFDMEKFQLSKHFCFPWPVNHTSLSPDSKLLAIVGDNPEGLLVDSQTGKTITQLCGHLDYSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDGQFMAMAEPADFVHVFDAKRGFEKEQEIDFFGEISGVSFSPDTESLFIGVWDRTYGSLLQYNRHRNYSYLDCL 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00571 452 Pfam Uncharacterised protein domain (DUF2415) 369 405 IPR019417 -
Adu04g00571 452 PANTHER TRANSCRIPTION FACTOR WD40-LIKE FAMILY-RELATED 9 452 - -
Adu04g00571 452 SUPERFAMILY WD40 repeat-like 189 433 IPR036322 GO:0005515
Adu04g00571 452 ProSiteProfiles Trp-Asp (WD) repeats profile. 321 362 IPR001680 GO:0005515
Adu04g00571 452 MobiDBLite consensus disorder prediction 29 59 - -
Adu04g00571 452 Gene3D - 243 450 IPR015943 GO:0005515
Adu04g00571 452 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 321 356 - -
Adu04g00571 452 Pfam WD domain, G-beta repeat 318 353 IPR001680 GO:0005515
Adu04g00571 452 PANTHER WD REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_8G05640)-RELATED 9 452 - -
Adu04g00571 452 SMART WD40_4 357 396 IPR001680 GO:0005515
Adu04g00571 452 SMART WD40_4 400 441 IPR001680 GO:0005515
Adu04g00571 452 SMART WD40_4 314 353 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00571 Adu-Chr4 7111528 7114605 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00571 309 433 Miscellaneous Gene Families AT5G08390 28.000 4.21e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00571 - - gmx:100788712 826.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g00571 04 7111528 7114605 Adu04g00571 04 7111528 7114605 ECH