Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0619 ATGAAGCTGTGGAATAGGGCTTCTGGAAATCTGAAAGACAGGAACAGCATATGGATGGCAAGTATATCAAGGAGGAGCCCCAATCGGAACCCTGATCTGGAGGCGGCCATCATTAGAGCCACCAGCCACGATGAGACATACGTGGATTACAGGAACGCCCAGAGAGTGTTTGCATGGGTGAAAACCTCGCCCGCCTACTTGAAGCCTCTTATATGGGCACTCTCAAAGCGGATGGAGAAGACCCGCAGCTGGGTGGTGGCCCTCAAAGGTCTCATGCTCATGCATGGAGTTTTCTGCTGCAAAATTCCCATCATGGAAAAGATCGGCCGCTTGCCTTTTGATCTTTCAAACTTCAGCGATGGCCACTCCCACTTATGCAAAACATGGGGTTTCAACAGCTTCATTCGTTCTTACTTTGCGTTCCTAGACCAAAGAGCCTTCTGGTTAGACATGGATACAAAGGAAGACGAAGAACAAACCCAAAAAACCAACGAGTCCATGCTGCAGGAACTCATAAAGCTCCAACAATGGCAGACTTTGCTCGACATGCTACTACAGATCAAACCAGAGGCTGCCCAAATGAATGTGGGTCTGATTCTCGAAGCAATGGACTGTATCATCATTGAGATTTTCGACATTTACAGCAGAATCTGCAATGGGGTAGCAAGAATCCTCGTAAAGATACATGCAGCTGGGAAGGTAGAAGCAAACATGGCACTTAAGGTTCTCAGAAAAGCAACCGCCCAAGGCGACCGGCTTTCCCTATATTTTGAACTTTGCAAGAATCTCGGTGTTCGTAATGCATCAAAATTTTCAAAAGTGGAGAAGATCCCACAAGAAGACATACGGGAACTGGAGCAAATCATTAATGGAGTGTTGGAAGATAAAGCCATAGTGGTGAGACAAAAGGGAAGCATTGAAGAGGGTAAGGGTACCGAGGGGTCTCCGAAGACGGTCATCAGTAAAAAGTGGGAGCGGTTTGATGAACAACTAAGAGGCAATAAAGAAGGAATTGGGGCTCCCGATGGAGGGAAAATGATTGTTGCACAAAACCCTTCCACAGCCACATGTAATTCTAGGCCTCATGCCCATCAACCTCTTCCTGATTTGATTACTGGGCTTTTTCCACCTGCTCAAATTTTAGAGAATGTACAATGA 1158 0.4646 MKLWNRASGNLKDRNSIWMASISRRSPNRNPDLEAAIIRATSHDETYVDYRNAQRVFAWVKTSPAYLKPLIWALSKRMEKTRSWVVALKGLMLMHGVFCCKIPIMEKIGRLPFDLSNFSDGHSHLCKTWGFNSFIRSYFAFLDQRAFWLDMDTKEDEEQTQKTNESMLQELIKLQQWQTLLDMLLQIKPEAAQMNVGLILEAMDCIIIEIFDIYSRICNGVARILVKIHAAGKVEANMALKVLRKATAQGDRLSLYFELCKNLGVRNASKFSKVEKIPQEDIRELEQIINGVLEDKAIVVRQKGSIEEGKGTEGSPKTVISKKWERFDEQLRGNKEGIGAPDGGKMIVAQNPSTATCNSRPHAHQPLPDLITGLFPPAQILENVQ* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0619 385 PANTHER CLATHRIN ASSEMBLY PROTEIN 5 315 IPR045192 GO:0048268|GO:0072583
Vvi1g0619 385 SUPERFAMILY GAT-like domain 169 291 - -
Vvi1g0619 385 SUPERFAMILY ENTH/VHS domain 32 149 IPR008942 -
Vvi1g0619 385 Pfam ANTH domain 32 290 IPR011417 GO:0005543
Vvi1g0619 385 FunFam Putative clathrin assembly protein 7 153 - -
Vvi1g0619 385 Gene3D ANTH domain 153 303 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Vvi1g0619 385 CDD ANTH_N_AP180_plant 33 145 - -
Vvi1g0619 385 Gene3D - 4 152 IPR008942 -
Vvi1g0619 385 ProSiteProfiles ENTH domain profile. 25 156 IPR013809 -
Vvi1g0619 385 FunFam Putative clathrin assembly protein 155 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0619 Vvi-Chr1 6168519 6169676 Dispersed