Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0616 ATGGGGTTTTTGAAGTGGCAGATCTCGGTAGTGTTGGTTGTCGGATTTGGGTTGAATCTGTGCTTTGGGCACGAGGGTCACCATTCTGGATCCTGTGCATCTGCGGTCCACGAGTCTCATGCTCACCACCACTGCGATCACGGAAGCCATTCCCATCATCATCATCATCATCATAGTCCAAGTGAGGAGAAGCTTACTATGTCCAAGCTCCCGGAGGAATTGGCTGAGGAGGAGGATCTGAAGTTGTACGGGCTCGGGTCCCACTACAACCACCATGACAGCCATGATCATGATCATGATCATGATCGTGATGCTCACGACCATGGGCTCTCTGGTGTTGGTTTGTGGGTTCATGCAATGGGCTGCTCACTGTTGGTGAGCATGGCTTCCCTTATTTGCCTCATTATTTTGCCAGTAATATTCATACAAGGAAAACCATCCAAGGCAGTTGTTGATTCATTGGCTGTATTTGGGGCAGGAGCCATGTTAGGGGATGCTTTTCTTCACCAGTTGCCACATGCTTTTGGTGGCGAACATTCCCATTCACATGATGAGCATGCTCATCATCATGGACATGAGCATTCACATTCACATTCTCTGAAAGATCTTTCTGTTGGATTATCTGTTCTTGGTGGAATTGTACTTTTTCTTCTTGTGGAGAAGCTTGTGAGGTATGTTGAAGGTATATCTGGTGGAGCTAATAGTGCATGGAGTCATGGTCATCACCACCATCATCGTAAGAATGGTAAAAAGATGAAGGATGATAATGATGCTTGTGACAATCAGCAGTCTGAGTCTCTCAGTGAAAAGAATCAGAGTACATTGATTCCAGAATCTGTTGACTGTTTAACTGGAGAAAAACAAACTGAACATGAATCTCTTCTTCGGAAGAGAAATAGTATTTCTGGTTTGAGAGAAGATAAATCAGATTCAGTTGCTGGAAATGGCTCCACCAATGATATTAAGTCCTTAAAGGAAAAAGAACCTGCTCAATCACCATCAAATCTTGTGTTTGGCTATCTTAATCTCTTTTCTGATGGTGTTCACAATTTTACTGATGGGATGGCTTTGGGAAGTGCTTTCTTGCTATATGGTTCTGTTGGTGGGTGGTCTCGAACTGTATTTTTGCTTGCTCATGAGCTCCCTCAAGAGGTTGGTGACTTTGGAATTCTGGTAAGATCTGGCTTCAGTGTCTCAAAGGCCCTCTTCTTCAACTTCCTCTCAGCTCTAGTTGCACTTGTTGGAACTGCTTTGGCTTTGCTCCTTGGACAAGATCCGGGACAGTCATCATTGATTGAGGGATTTACAGCTGGTGGATTTATCTACATTGCAGTTGCTGGAGTGCTACCAGAAATGAACAATGGAAACTCAACATTGAAGGGCACATTTATCCAATTAACCTCGCTGATATTGGGCATGGCTGTTGCCCTTGGTATTTCCCTTGTAGAATGA 1452 0.4421 MGFLKWQISVVLVVGFGLNLCFGHEGHHSGSCASAVHESHAHHHCDHGSHSHHHHHHHSPSEEKLTMSKLPEELAEEEDLKLYGLGSHYNHHDSHDHDHDHDRDAHDHGLSGVGLWVHAMGCSLLVSMASLICLIILPVIFIQGKPSKAVVDSLAVFGAGAMLGDAFLHQLPHAFGGEHSHSHDEHAHHHGHEHSHSHSLKDLSVGLSVLGGIVLFLLVEKLVRYVEGISGGANSAWSHGHHHHHRKNGKKMKDDNDACDNQQSESLSEKNQSTLIPESVDCLTGEKQTEHESLLRKRNSISGLREDKSDSVAGNGSTNDIKSLKEKEPAQSPSNLVFGYLNLFSDGVHNFTDGMALGSAFLLYGSVGGWSRTVFLLAHELPQEVGDFGILVRSGFSVSKALFFNFLSALVALVGTALALLLGQDPGQSSLIEGFTAGGFIYIAVAGVLPEMNNGNSTLKGTFIQLTSLILGMAVALGISLVE* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0616 483 MobiDBLite consensus disorder prediction 175 197 - -
Vvi1g0616 483 MobiDBLite consensus disorder prediction 176 197 - -
Vvi1g0616 483 MobiDBLite consensus disorder prediction 43 68 - -
Vvi1g0616 483 MobiDBLite consensus disorder prediction 261 277 - -
Vvi1g0616 483 PANTHER ZINC TRANSPORTER SLC39A7 HISTIDINE-RICH MEMBRANE PROTEIN KE4 19 482 - -
Vvi1g0616 483 Pfam ZIP Zinc transporter 114 479 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vvi1g0616 483 MobiDBLite consensus disorder prediction 305 328 - -
Vvi1g0616 483 MobiDBLite consensus disorder prediction 234 277 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0616 69 433 Organic Solute Cotransporters AT1G68100 62.534 5.09e-131 385